RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HTN3P15516 51 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
EDEM3-203ENST00000439962 Q6ZQT7 251 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 MAPKAPK5-AS1Q8N8E1 139 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 SLC25A29Q8N8R3 303 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 ZNF479Q96JC4 524 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 WWC2-AS2Q96NR7 200 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 AMELXQ99217 191 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 ZNF815PA8K554 130 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 TIMM17BO60830 172 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 INSP01308 110 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 SCGB1A1P11684 91 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 ZNF56Q15929 161 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 MORN3Q6PF18 240 aaPredicted RBP3.42□□□□□ -1.86
EDEM3-203ENST00000439962 IL17DQ8TAD2 202 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 HYDINQ4G0P3 5121 aa3.42□□□□□ -1.86
EDEM3-203ENST00000439962 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 A0A0B4J2C4 111 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 A0A0J9YXY3 114 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 A0A0J9YY99 117 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 F5H697 171 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 RS1O15537 224 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 IGHV3-53P01767 116 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 SPATA25Q9BR10 227 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 C19orf73Q9NVV2 129 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 CSDC2Q9Y534 153 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 PLECQ15149 4684 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 TRBV10-1A0A0K0K1A3 114 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 TINCRA0A1B0GVN0 87 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 TMEM238C9JI98 176 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 SPINK13Q1W4C9 94 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 H7C423 109 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 UBE2D3P61077 147 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 UBE2D2P62837 147 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 RPL24P83731 157 aaKnown RBP3.41□□□□□ -1.86
EDEM3-203ENST00000439962 MUC7Q8TAX7 377 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 OVOL2Q9BRP0 275 aa3.41□□□□□ -1.86
EDEM3-203ENST00000439962 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 H3BMG7 143 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 J3QQQ9 107 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 SPRY2O43597 315 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 TIRAPP58753 221 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 SCGB1D4Q6XE38 83 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 C11orf72Q8NBR9 251 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 SPANXCQ9NY87 97 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 TNFRSF18Q9Y5U5 241 aa3.4□□□□□ -1.86
EDEM3-203ENST00000439962 IGHV3-30P01768 117 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 P0DMU3 169 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 FAM231AP0DMU4 169 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 FAM231CP0DMU5 169 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 IGHV3-30-5P0DP03 117 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 IFITM1P13164 125 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 APOC4P55056 127 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 CASC10Q5T4H9 136 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 TM2D3Q9BRN9 247 aa3.4□□□□□ -1.87
EDEM3-203ENST00000439962 A0A087WWL8 130 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 LY6G6CO95867 125 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 NHLRC4P0CG21 123 aaPredicted RBP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 ZNF22P17026 224 aaPredicted RBP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 RAB37Q96AX2 223 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 TCTAP57738 103 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 GAGE13Q4V321 117 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 CFAP126Q5VTH2 177 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 C10orf126Q8N4M7 172 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 ZNRF2Q8NHG8 242 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 VPS25Q9BRG1 176 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 C1QTNF4Q9BXJ3 329 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
EDEM3-203ENST00000439962 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
EDEM3-203ENST00000439962 IGHV1-58A0A0C4DH39 117 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 PCP4P48539 62 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 COTL1Q14019 142 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 JPT2Q9H910 190 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 TRAV4A0A0B4J268 109 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 RBMY1A1P0DJD3 496 aaKnown RBP3.38□□□□□ -1.87
EDEM3-203ENST00000439962 RBMY1CP0DJD4 496 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 RPL39P62891 51 aaKnown RBP3.38□□□□□ -1.87
EDEM3-203ENST00000439962 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
EDEM3-203ENST00000439962 TMEM170BQ5T4T1 132 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 TMEM263Q8WUH6 116 aaKnown RBP3.38□□□□□ -1.87
EDEM3-203ENST00000439962 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 MRPL16Q9NX20 251 aaKnown RBP3.38□□□□□ -1.87
EDEM3-203ENST00000439962 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
EDEM3-203ENST00000439962 SACSQ9NZJ4 4579 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms