RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ZNF56Q15929 161 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 SLC25A29Q8N8R3 303 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 RMI2Q96E14 147 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 LAMTOR2Q9Y2Q5 125 aa7.2□□□□□ -1.26
CSTF3-203ENST00000438862 PHOX2AO14813 284 aa7.19□□□□□ -1.26
CSTF3-203ENST00000438862 NIT2Q9NQR4 276 aa7.19□□□□□ -1.26
CSTF3-203ENST00000438862 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 APCSP02743 223 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 MGPP08493 103 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 RAB5AP20339 215 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 CKS2P33552 79 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 MRPL51Q4U2R6 128 aaKnown RBP7.18□□□□□ -1.26
CSTF3-203ENST00000438862 SUMO4Q6EEV6 95 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
CSTF3-203ENST00000438862 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 IGHV3-73A0A0B4J1V6 119 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 SCO1O75880 301 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
CSTF3-203ENST00000438862 C14orf177Q52M58 125 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
CSTF3-203ENST00000438862 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 GTSF1LQ9H1H1 148 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 TRAPPC1Q9Y5R8 145 aa7.17□□□□□ -1.26
CSTF3-203ENST00000438862 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
CSTF3-203ENST00000438862 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
CSTF3-203ENST00000438862 FABP9Q0Z7S8 132 aa7.16□□□□□ -1.26
CSTF3-203ENST00000438862 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.16□□□□□ -1.26
CSTF3-203ENST00000438862 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
CSTF3-203ENST00000438862 D6R8Y8 96 aa7.15□□□□□ -1.26
CSTF3-203ENST00000438862 LINC00694P0DN24 101 aa7.15□□□□□ -1.26
CSTF3-203ENST00000438862 RPS10P46783 165 aaKnown RBP7.15□□□□□ -1.26
CSTF3-203ENST00000438862 TMEM97Q5BJF2 176 aa7.15□□□□□ -1.26
CSTF3-203ENST00000438862 DAZ4Q86SG3 579 aaKnown RBP7.15□□□□□ -1.26
CSTF3-203ENST00000438862 NEXN-AS1Q8NBZ9 246 aa7.15□□□□□ -1.26
CSTF3-203ENST00000438862 DAZ3Q9NR90 486 aaKnown RBP7.15□□□□□ -1.26
CSTF3-203ENST00000438862 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 TRAV26-2A0A0B4J265 109 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 TCAPO15273 167 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 TNFRSF6BO95407 300 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
CSTF3-203ENST00000438862 UBE2D3P61077 147 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 SUMO2P61956 95 aaKnown RBP7.14□□□□□ -1.27
CSTF3-203ENST00000438862 UBE2D2P62837 147 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 NRACQ8N912 160 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 ST20Q9HBF5 79 aa7.14□□□□□ -1.27
CSTF3-203ENST00000438862 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
CSTF3-203ENST00000438862 K7EMI3 77 aa7.13□□□□□ -1.27
CSTF3-203ENST00000438862 VCYO14598 125 aa7.13□□□□□ -1.27
CSTF3-203ENST00000438862 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
CSTF3-203ENST00000438862 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
CSTF3-203ENST00000438862 NCR2O95944 276 aa7.12□□□□□ -1.27
CSTF3-203ENST00000438862 TRGC2P03986 189 aa7.12□□□□□ -1.27
CSTF3-203ENST00000438862 ODF1Q14990 250 aa7.12□□□□□ -1.27
CSTF3-203ENST00000438862 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 I3L3M4 83 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 NPYP01303 97 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 GAGE1Q13065 139 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 GAGE4Q13068 117 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 GAGE5Q13069 117 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 DGAT2L7PQ6IED9 249 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
CSTF3-203ENST00000438862 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 NXT2Q9NPJ8 142 aaKnown RBP7.11□□□□□ -1.27
CSTF3-203ENST00000438862 Q9UF83 564 aa7.11□□□□□ -1.27
CSTF3-203ENST00000438862 PMCHP20382 165 aa7.1□□□□□ -1.27
CSTF3-203ENST00000438862 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
CSTF3-203ENST00000438862 KIR2DL4Q99706 377 aa7.1□□□□□ -1.27
CSTF3-203ENST00000438862 SMIM2Q9BVW6 85 aa7.1□□□□□ -1.27
CSTF3-203ENST00000438862 LPAP08519 4548 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 G0S2P27469 103 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 RAB5BP61020 215 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 Q0VG73 95 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 COTL1Q14019 142 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 Q8N8P6 123 aa7.09□□□□□ -1.27
CSTF3-203ENST00000438862 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 LINC01546A6NGU7 62 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 LINC01549A6NIU2 74 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 IQCJQ1A5X6 159 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 C18orf32Q8TCD1 76 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
CSTF3-203ENST00000438862 C1orf196B1AJZ1 125 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 H7C423 109 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 PKIAP61925 76 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 NIT1Q86X76 327 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
CSTF3-203ENST00000438862 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 IGHV1-24A0A0C4DH33 117 aa7.06□□□□□ -1.28
CSTF3-203ENST00000438862 PANO1I0J062 215 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms