RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DEFB4AO15263 64 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 K7EQD1 137 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 PRM2P04554 102 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 IFITM1P13164 125 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 SS18Q15532 418 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 Q6ZTI0 123 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 ZNF575Q86XF7 245 aa8.56□□□□□ -1.04
TRAPPC9-202ENST00000438773 TRBV7-3A0A075B6L6 115 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 ESM1Q9NQ30 184 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 HHLA3Q9XRX5 114 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 RNF183Q96D59 192 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 BAALCQ8WXS3 180 aa8.55□□□□□ -1.04
TRAPPC9-202ENST00000438773 CLEC2BQ92478 149 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 GYPEP15421 78 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 TAL2Q16559 108 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
TRAPPC9-202ENST00000438773 SOCS3O14543 225 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 C20orf203Q8NBC4 194 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 CITED1Q99966 193 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
TRAPPC9-202ENST00000438773 DAZ2Q13117 558 aaKnown RBP8.52□□□□□ -1.04
TRAPPC9-202ENST00000438773 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.04
TRAPPC9-202ENST00000438773 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.04
TRAPPC9-202ENST00000438773 CHD6Q8TD26 2715 aa8.52□□□□□ -1.04
TRAPPC9-202ENST00000438773 TCL1BO95988 128 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 ODF3L2Q3SX64 289 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 LINC00482Q8N8I6 264 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 ATP6V0E2Q8NHE4 81 aa8.52□□□□□ -1.05
TRAPPC9-202ENST00000438773 HERVK_113P63121 156 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 Q9H8V8 135 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 IGHV4-4A0A075B6R2 117 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 PROK1P58294 105 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 NRACQ8N912 160 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 M0QY20 66 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 ATP5G1P05496 136 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 LAMTOR3Q9UHA4 124 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 FLNCQ14315 2725 aa8.51□□□□□ -1.05
TRAPPC9-202ENST00000438773 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 TEP1Q99973 2627 aaKnown RBP8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 LEPROTO15243 131 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 NDUFA7O95182 113 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
TRAPPC9-202ENST00000438773 A8MZ25 164 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 TEX49A0A1B0GTD5 131 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 CRYGDP07320 174 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 E9PLD3 99 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 CFAP126Q5VTH2 177 aa8.49□□□□□ -1.05
TRAPPC9-202ENST00000438773 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
TRAPPC9-202ENST00000438773 C5orf38Q86SI9 138 aa8.48□□□□□ -1.05
TRAPPC9-202ENST00000438773 XCL1P47992 114 aa8.48□□□□□ -1.05
TRAPPC9-202ENST00000438773 Q6ZUT4 128 aa8.47□□□□□ -1.05
TRAPPC9-202ENST00000438773 Q8N2B8 174 aa8.47□□□□□ -1.05
TRAPPC9-202ENST00000438773 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
TRAPPC9-202ENST00000438773 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 BAALC-AS2P0C853 105 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 HAMPP81172 84 aa8.46□□□□□ -1.05
TRAPPC9-202ENST00000438773 HRNRQ86YZ3 2850 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 FSHBP01225 129 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 NEXN-AS1Q8NBZ9 246 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 MUC4Q99102 2169 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 IGLV2-18A0A075B6J9 118 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 TM2D2Q9BX73 214 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 C16orf95Q9H693 158 aa8.46□□□□□ -1.06
TRAPPC9-202ENST00000438773 PSCAO43653 123 aa8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 Q9HAA7 133 aa8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
TRAPPC9-202ENST00000438773 A0A096LNT2 108 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms