RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 F8WDY8 70 aa5.66□□□□□ -1.5
RTN4-211ENST00000438462 AQP4P55087 323 aa5.66□□□□□ -1.5
RTN4-211ENST00000438462 LSM3P62310 102 aaKnown RBP5.66□□□□□ -1.5
RTN4-211ENST00000438462 C15orf40Q8WUR7 153 aa5.66□□□□□ -1.5
RTN4-211ENST00000438462 SMIM4Q8WVI0 70 aa5.66□□□□□ -1.5
RTN4-211ENST00000438462 MARVELD1Q9BSK0 173 aa5.66□□□□□ -1.5
RTN4-211ENST00000438462 APCSP02743 223 aa5.65□□□□□ -1.5
RTN4-211ENST00000438462 SULT1A1P50225 295 aa5.65□□□□□ -1.5
RTN4-211ENST00000438462 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
RTN4-211ENST00000438462 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
RTN4-211ENST00000438462 MRPS26Q9BYN8 205 aaKnown RBP5.65□□□□□ -1.5
RTN4-211ENST00000438462 ANKRD20A5PA0PJZ0 165 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 IGSF23A1L1A6 192 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 UBE2G2P60604 165 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 RPS20P60866 119 aaKnown RBP5.64□□□□□ -1.51
RTN4-211ENST00000438462 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
RTN4-211ENST00000438462 HBG1P69891 147 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 HBG2P69892 147 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 Q86TA4 180 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 NIT2Q9NQR4 276 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 KCNIP2Q9NS61 270 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 TP73-AS1Q9UF72 201 aa5.64□□□□□ -1.51
RTN4-211ENST00000438462 LSM5Q9Y4Y9 91 aaKnown RBP5.64□□□□□ -1.51
RTN4-211ENST00000438462 MRPS10P82664 201 aaKnown RBP5.63□□□□□ -1.51
RTN4-211ENST00000438462 MCFD2Q8NI22 146 aa5.63□□□□□ -1.51
RTN4-211ENST00000438462 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
RTN4-211ENST00000438462 EPDR1Q9UM22 224 aa5.63□□□□□ -1.51
RTN4-211ENST00000438462 C1orf196B1AJZ1 125 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 SNAI2O43623 268 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 STX12Q86Y82 276 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 LINC00469Q8N7U9 141 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 LINC00167Q96N53 147 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
RTN4-211ENST00000438462 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
RTN4-211ENST00000438462 ATP6V1FQ16864 119 aa5.61□□□□□ -1.51
RTN4-211ENST00000438462 PQLC2Q6ZP29 291 aa5.61□□□□□ -1.51
RTN4-211ENST00000438462 CNBD2Q96M20 576 aa5.61□□□□□ -1.51
RTN4-211ENST00000438462 PNRC1Q12796 327 aaPredicted RBP5.6□□□□□ -1.51
RTN4-211ENST00000438462 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
RTN4-211ENST00000438462 XAGE1AQ9HD64 81 aa5.6□□□□□ -1.51
RTN4-211ENST00000438462 C20orf202A1L168 122 aa5.59□□□□□ -1.51
RTN4-211ENST00000438462 HMGB3O15347 200 aaKnown RBP5.59□□□□□ -1.51
RTN4-211ENST00000438462 NCR2O95944 276 aa5.59□□□□□ -1.51
RTN4-211ENST00000438462 IGLV6-57P01721 117 aa5.59□□□□□ -1.51
RTN4-211ENST00000438462 MZT2AQ6P582 158 aa5.59□□□□□ -1.51
RTN4-211ENST00000438462 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
RTN4-211ENST00000438462 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
RTN4-211ENST00000438462 C9orf170A2RU37 121 aa5.58□□□□□ -1.52
RTN4-211ENST00000438462 SUMO1P63165 101 aaKnown RBP5.58□□□□□ -1.52
RTN4-211ENST00000438462 FAM19A1Q7Z5A9 133 aa5.58□□□□□ -1.52
RTN4-211ENST00000438462 CYTL1Q9NRR1 136 aa5.58□□□□□ -1.52
RTN4-211ENST00000438462 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
RTN4-211ENST00000438462 C17orf112F2Z3M2 114 aa5.57□□□□□ -1.52
RTN4-211ENST00000438462 NCS1P62166 190 aa5.57□□□□□ -1.52
RTN4-211ENST00000438462 NEDD8Q15843 81 aa5.57□□□□□ -1.52
RTN4-211ENST00000438462 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
RTN4-211ENST00000438462 WDR61Q9GZS3 305 aaKnown RBP5.57□□□□□ -1.52
RTN4-211ENST00000438462 CTDSP2O14595 271 aa5.56□□□□□ -1.52
RTN4-211ENST00000438462 ARL14EPLP0DKL9 152 aa5.56□□□□□ -1.52
RTN4-211ENST00000438462 COX8CQ7Z4L0 72 aa5.56□□□□□ -1.52
RTN4-211ENST00000438462 CXCL1P09341 107 aa5.55□□□□□ -1.52
RTN4-211ENST00000438462 C2orf82Q6UX34 121 aa5.55□□□□□ -1.52
RTN4-211ENST00000438462 CCDC32Q9BV29 185 aa5.55□□□□□ -1.52
RTN4-211ENST00000438462 A6NN06 94 aa5.54□□□□□ -1.52
RTN4-211ENST00000438462 ZNF727A8MUV8 499 aa5.54□□□□□ -1.52
RTN4-211ENST00000438462 PVALBP20472 110 aaPredicted RBP5.54□□□□□ -1.52
RTN4-211ENST00000438462 CBLN2Q8IUK8 224 aa5.54□□□□□ -1.52
RTN4-211ENST00000438462 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
RTN4-211ENST00000438462 IGKV2-28A0A075B6P5 120 aa5.53□□□□□ -1.52
RTN4-211ENST00000438462 UPK1BO75841 260 aa5.53□□□□□ -1.52
RTN4-211ENST00000438462 IGKV2D-28P01615 120 aa5.53□□□□□ -1.52
RTN4-211ENST00000438462 FOXA3P55318 350 aaPredicted RBP5.53□□□□□ -1.52
RTN4-211ENST00000438462 RPL32P62910 135 aaKnown RBP5.53□□□□□ -1.52
RTN4-211ENST00000438462 MRPL52Q86TS9 123 aaKnown RBP5.53□□□□□ -1.52
RTN4-211ENST00000438462 MRAP2Q96G30 205 aa5.53□□□□□ -1.52
RTN4-211ENST00000438462 HIGD2AQ9BW72 106 aa5.53□□□□□ -1.52
RTN4-211ENST00000438462 A0A1W2PPV4 95 aa5.52□□□□□ -1.53
RTN4-211ENST00000438462 NHLH2Q02577 135 aa5.52□□□□□ -1.53
RTN4-211ENST00000438462 MOBPQ13875 183 aa5.52□□□□□ -1.53
RTN4-211ENST00000438462 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
RTN4-211ENST00000438462 PEX7O00628 323 aa5.51□□□□□ -1.53
RTN4-211ENST00000438462 FAUP35544 74 aaKnown RBP5.51□□□□□ -1.53
RTN4-211ENST00000438462 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
RTN4-211ENST00000438462 ZFP30Q9Y2G7 519 aa5.51□□□□□ -1.53
RTN4-211ENST00000438462 VBP1P61758 197 aa5.5□□□□□ -1.53
RTN4-211ENST00000438462 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
RTN4-211ENST00000438462 RBM38Q9H0Z9 239 aaKnown RBP5.5□□□□□ -1.53
RTN4-211ENST00000438462 SPRR2DP22532 72 aa5.49□□□□□ -1.53
RTN4-211ENST00000438462 GCHFRP30047 84 aa5.49□□□□□ -1.53
RTN4-211ENST00000438462 IGHV3OR16-9A0A0B4J2B5 98 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 FAM25EA8MYX2 175 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 RGS5O15539 181 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 DEFA1P59665 94 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 GATD1Q8NB37 220 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 TPPP3Q9BW30 176 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 TMEM126AQ9H061 195 aa5.48□□□□□ -1.53
RTN4-211ENST00000438462 ZNF706Q9Y5V0 76 aaPredicted RBP5.48□□□□□ -1.53
RTN4-211ENST00000438462 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms