RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ORMDL3Q8N138 153 aa12.12□□□□□ -0.47
HLA-F-220ENST00000434407 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
HLA-F-220ENST00000434407 KIR2DL4Q99706 377 aa12.12□□□□□ -0.47
HLA-F-220ENST00000434407 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
HLA-F-220ENST00000434407 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-220ENST00000434407 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
HLA-F-220ENST00000434407 TMEM136Q6ZRR5 245 aa12.11□□□□□ -0.47
HLA-F-220ENST00000434407 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
HLA-F-220ENST00000434407 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
HLA-F-220ENST00000434407 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
HLA-F-220ENST00000434407 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
HLA-F-220ENST00000434407 PRSS47A8MTI9 375 aa12.1□□□□□ -0.47
HLA-F-220ENST00000434407 COX19Q49B96 90 aa12.1□□□□□ -0.47
HLA-F-220ENST00000434407 AMMECR1LQ6DCA0 310 aa12.1□□□□□ -0.47
HLA-F-220ENST00000434407 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
HLA-F-220ENST00000434407 HSPG2P98160 4391 aa12.09□□□□□ -0.47
HLA-F-220ENST00000434407 TCAPO15273 167 aa12.09□□□□□ -0.47
HLA-F-220ENST00000434407 FCER1GP30273 86 aa12.09□□□□□ -0.47
HLA-F-220ENST00000434407 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
HLA-F-220ENST00000434407 LECT2O14960 151 aa12.08□□□□□ -0.48
HLA-F-220ENST00000434407 RNASEKQ6P5S7 137 aaKnown RBP12.08□□□□□ -0.48
HLA-F-220ENST00000434407 C1orf196B1AJZ1 125 aa12.07□□□□□ -0.48
HLA-F-220ENST00000434407 CDK2AP2O75956 126 aa12.07□□□□□ -0.48
HLA-F-220ENST00000434407 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
HLA-F-220ENST00000434407 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
HLA-F-220ENST00000434407 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
HLA-F-220ENST00000434407 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
HLA-F-220ENST00000434407 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 IGLV5-52A0A0A0MRZ9 124 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 TRGC2P03986 189 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 OR5A1Q8NGJ0 315 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
HLA-F-220ENST00000434407 DNAH8Q96JB1 4490 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 GCSHP23434 173 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 LINC00528Q8N1L1 170 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 TIMM21Q9BVV7 248 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
HLA-F-220ENST00000434407 USP17L23D6RBM5 183 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 MT-ND6P03923 174 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 RAB5BP61020 215 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 C14orf177Q52M58 125 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
HLA-F-220ENST00000434407 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
HLA-F-220ENST00000434407 MAP1LC3AQ9H492 121 aa12.02□□□□□ -0.49
HLA-F-220ENST00000434407 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
HLA-F-220ENST00000434407 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
HLA-F-220ENST00000434407 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
HLA-F-220ENST00000434407 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
HLA-F-220ENST00000434407 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
HLA-F-220ENST00000434407 Q8N8P6 123 aa12□□□□□ -0.49
HLA-F-220ENST00000434407 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
HLA-F-220ENST00000434407 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
HLA-F-220ENST00000434407 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
HLA-F-220ENST00000434407 FAM104AQ969W3 186 aa11.99□□□□□ -0.49
HLA-F-220ENST00000434407 LOC389332A0A1B0GUA5 103 aa11.98□□□□□ -0.49
HLA-F-220ENST00000434407 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
HLA-F-220ENST00000434407 PRSS1P07477 247 aa11.98□□□□□ -0.49
HLA-F-220ENST00000434407 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
HLA-F-220ENST00000434407 K7EMI3 77 aa11.97□□□□□ -0.49
HLA-F-220ENST00000434407 CCL25O15444 150 aa11.96□□□□□ -0.49
HLA-F-220ENST00000434407 XGP55808 180 aa11.96□□□□□ -0.49
HLA-F-220ENST00000434407 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
HLA-F-220ENST00000434407 FOXI1Q12951 378 aa11.96□□□□□ -0.49
HLA-F-220ENST00000434407 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
HLA-F-220ENST00000434407 Q6ZUT4 128 aa11.96□□□□□ -0.49
HLA-F-220ENST00000434407 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.49
HLA-F-220ENST00000434407 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-220ENST00000434407 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BKO60814 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BJP06899 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BOP23527 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 SS18Q15532 418 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
HLA-F-220ENST00000434407 Q6ZSA8 131 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 C15orf56Q8N910 161 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
HLA-F-220ENST00000434407 S100A6P06703 90 aa11.93□□□□□ -0.5
HLA-F-220ENST00000434407 XCL1P47992 114 aa11.93□□□□□ -0.5
HLA-F-220ENST00000434407 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
HLA-F-220ENST00000434407 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
HLA-F-220ENST00000434407 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
HLA-F-220ENST00000434407 KRTAP17-1Q9BYP8 105 aa11.93□□□□□ -0.5
HLA-F-220ENST00000434407 NDUFA6P56556 154 aa11.92□□□□□ -0.5
HLA-F-220ENST00000434407 CNBPP62633 177 aaKnown RBP11.92□□□□□ -0.5
HLA-F-220ENST00000434407 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
HLA-F-220ENST00000434407 OPRPNQ99935 248 aaPredicted RBP11.92□□□□□ -0.5
HLA-F-220ENST00000434407 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
HLA-F-220ENST00000434407 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms