RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
SEC16A-206ENST00000431893 SPRY4Q9C004 299 aa8.48□□□□□ -1.05
SEC16A-206ENST00000431893 M0QXV9 152 aa8.48□□□□□ -1.05
SEC16A-206ENST00000431893 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
SEC16A-206ENST00000431893 FAM19A3Q7Z5A8 133 aa8.48□□□□□ -1.05
SEC16A-206ENST00000431893 MALRD1Q5VYJ5 2156 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 PCNX2A6NKB5 2137 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 UBE2D1P51668 147 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 H7C423 109 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 Q6ZSV7 163 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 NCOA6Q14686 2063 aaPredicted RBP8.47□□□□□ -1.05
SEC16A-206ENST00000431893 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
SEC16A-206ENST00000431893 ODF3BA8MYP8 253 aa8.46□□□□□ -1.05
SEC16A-206ENST00000431893 TSHBP01222 138 aa8.46□□□□□ -1.05
SEC16A-206ENST00000431893 P0C879 139 aa8.46□□□□□ -1.05
SEC16A-206ENST00000431893 PRR9Q5T870 116 aa8.46□□□□□ -1.05
SEC16A-206ENST00000431893 K7EQG2 157 aa8.46□□□□□ -1.06
SEC16A-206ENST00000431893 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
SEC16A-206ENST00000431893 NOTCH3Q9UM47 2321 aa8.46□□□□□ -1.06
SEC16A-206ENST00000431893 COL4A3Q01955 1670 aa8.46□□□□□ -1.06
SEC16A-206ENST00000431893 KIAA1549LQ6ZVL6 1849 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 HILS1P60008 231 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 Q8N9L7 120 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 U3KQK5 164 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 NUP210LQ5VU65 1888 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 UBE2D3P61077 147 aa8.45□□□□□ -1.06
SEC16A-206ENST00000431893 GVINP1Q7Z2Y8 2422 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 LYRM9A8MSI8 78 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 SHANK1Q9Y566 2161 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 A0A087WVE0 104 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 COX7CP15954 63 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 X6R8D5 127 aa8.44□□□□□ -1.06
SEC16A-206ENST00000431893 Q6YL49 198 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 KIR2DL5BQ8NHK3 375 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 NRACQ8N912 160 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 MIFP14174 115 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 C2orf16Q68DN1 1984 aa8.43□□□□□ -1.06
SEC16A-206ENST00000431893 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
SEC16A-206ENST00000431893 EBI3Q14213 229 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 DAZAP2Q15038 168 aaPredicted RBP8.42□□□□□ -1.06
SEC16A-206ENST00000431893 Q8NA96 180 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 LMO4P61968 165 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 PSPHP1O15172 72 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 IGLV2-11P01706 119 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 C9orf116Q5BN46 136 aaPredicted RBP8.42□□□□□ -1.06
SEC16A-206ENST00000431893 LST1O00453 97 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 EDN2P20800 178 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
SEC16A-206ENST00000431893 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 C11orf21Q9P2W6 132 aa8.42□□□□□ -1.06
SEC16A-206ENST00000431893 ESRGQ1W209 222 aa8.41□□□□□ -1.06
SEC16A-206ENST00000431893 CNOT1A5YKK6 2376 aaKnown RBP8.41□□□□□ -1.06
SEC16A-206ENST00000431893 TNFRSF13BO14836 293 aaPredicted RBP8.41□□□□□ -1.06
SEC16A-206ENST00000431893 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
SEC16A-206ENST00000431893 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
SEC16A-206ENST00000431893 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
SEC16A-206ENST00000431893 YPEL4Q96NS1 127 aa8.41□□□□□ -1.06
SEC16A-206ENST00000431893 Q6ZVQ6 151 aa8.4□□□□□ -1.06
SEC16A-206ENST00000431893 ATP5EP56381 51 aaPredicted RBP8.4□□□□□ -1.06
SEC16A-206ENST00000431893 M0R378 163 aa8.4□□□□□ -1.06
SEC16A-206ENST00000431893 DEFB116Q30KQ4 102 aa8.4□□□□□ -1.07
SEC16A-206ENST00000431893 PMAIP1Q13794 54 aa8.4□□□□□ -1.07
SEC16A-206ENST00000431893 CRIP3Q6Q6R5 217 aa8.4□□□□□ -1.07
SEC16A-206ENST00000431893 SPINK1P00995 79 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 NDUFC1O43677 76 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
SEC16A-206ENST00000431893 IGF2-ASQ6U949 168 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 UBE2D2P62837 147 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 ZNF843Q8N446 348 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 A0A087WYN8 130 aa8.39□□□□□ -1.07
SEC16A-206ENST00000431893 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 LY6G6CO95867 125 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 ACACAQ13085 2346 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
SEC16A-206ENST00000431893 PCNX1Q96RV3 2341 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 ZNF73O43830 326 aaPredicted RBP8.38□□□□□ -1.07
SEC16A-206ENST00000431893 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
SEC16A-206ENST00000431893 DHRS4-AS1Q9P1J3 65 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 TNCP24821 2201 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 SMIM9A6NGZ8 99 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 COX6A2Q02221 97 aa8.37□□□□□ -1.07
SEC16A-206ENST00000431893 IGHV6-1A0A0B4J1U7 121 aa8.36□□□□□ -1.07
SEC16A-206ENST00000431893 PCDH15Q96QU1 1955 aa8.36□□□□□ -1.07
SEC16A-206ENST00000431893 LRRC75A-AS1Q8N1F1 130 aa8.35□□□□□ -1.07
SEC16A-206ENST00000431893 MED12LQ86YW9 2145 aa8.35□□□□□ -1.07
SEC16A-206ENST00000431893 SPTAN1Q13813 2472 aaKnown RBP8.35□□□□□ -1.07
SEC16A-206ENST00000431893 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
SEC16A-206ENST00000431893 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms