RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 H0YGX0 51 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 CTSGP08311 255 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 LRBAP50851 2863 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 NDPQ00604 133 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 ZFAND2AQ8N6M9 145 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 MPLKIPQ8TAP9 179 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 SNURFQ9Y675 71 aa6.43□□□□□ -1.38
CDC42BPA-206ENST00000429440 PTPRQQ9UMZ3 2332 aa6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 IGHV1-3A0A0C4DH29 117 aa6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 ESRGQ1W209 222 aa6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 S4R3C0 116 aa6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 U3KQE9 123 aa6.42□□□□□ -1.38
CDC42BPA-206ENST00000429440 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 DEFB104AQ8WTQ1 72 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 F5H697 171 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 MIFP14174 115 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 FAM229BQ4G0N7 80 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 PIK3CD-AS1Q5SR53 167 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 STHQ8IWL8 128 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 FAM104AQ969W3 186 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
CDC42BPA-206ENST00000429440 CLPSL1A2RUU4 121 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 IGHV1-8P0DP01 117 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 CD28P10747 220 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 BSPH1Q075Z2 132 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 MUC4Q99102 2169 aa6.4□□□□□ -1.38
CDC42BPA-206ENST00000429440 M0QY20 66 aa6.4□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGLV1-47P01700 117 aa6.4□□□□□ -1.39
CDC42BPA-206ENST00000429440 HOXD3P31249 432 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-206ENST00000429440 PIEZO1Q92508 2521 aa6.4□□□□□ -1.39
CDC42BPA-206ENST00000429440 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-206ENST00000429440 NCR3O14931 201 aa6.39□□□□□ -1.39
CDC42BPA-206ENST00000429440 A0A087WYN8 130 aa6.39□□□□□ -1.39
CDC42BPA-206ENST00000429440 GNRH2O43555 120 aa6.39□□□□□ -1.39
CDC42BPA-206ENST00000429440 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 TRBV7-4A0A0J9YYF1 115 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 DAD1P61803 113 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 LYPD2Q6UXB3 125 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 CSMD1Q96PZ7 3565 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGF2RP11717 2491 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 NDUFB3O43676 98 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGF1P05019 195 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 DYNLRB2Q8TF09 96 aa6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 ITLN2Q8WWU7 325 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 CRPP02741 224 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 C6orf223Q8N319 242 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 CCDC140Q96MF4 163 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 TM2D3Q9BRN9 247 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 Q9H8V8 135 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 ORMDL1Q9P0S3 153 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 A0A087WWL8 130 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 F6UB75 175 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 Q1T7F1 81 aa6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 ANKHD1Q8IWZ3 2542 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-206ENST00000429440 SPTA1P02549 2419 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 E7EQL1 145 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 NPBQ8NG41 125 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 ABCA4P78363 2273 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 SVEP1Q4LDE5 3571 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 ATRXP46100 2492 aa6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 TPRP12270 2363 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-206ENST00000429440 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 UNQ9165/PRO28630Q6UXU0 137 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 CCL17Q92583 94 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 NBASA2RRP1 2371 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGHV3-23P01764 117 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
CDC42BPA-206ENST00000429440 IGHV3OR16-8A0A075B7F1 116 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 LECT2O14960 151 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 KAAG1Q9UBP8 84 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 RBM12B-AS1Q9P1G2 102 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 Q9UF83 564 aa6.34□□□□□ -1.39
CDC42BPA-206ENST00000429440 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 TMEM254Q8TBM7 123 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 CXCL6P80162 114 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 ADORA2A-AS1P86434 159 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 Q6ZTC4 211 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 LINC00337Q8N6G1 96 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 C11orf72Q8NBR9 251 aa6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 C11orf68Q9H3H3 251 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-206ENST00000429440 WNK2Q9Y3S1 2297 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 FAM74A4Q5TZK3 123 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms