RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
C9orf3-206ENST00000428313 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
C9orf3-206ENST00000428313 RPL35AP18077 110 aaKnown RBP11.57□□□□□ -0.56
C9orf3-206ENST00000428313 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
C9orf3-206ENST00000428313 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
C9orf3-206ENST00000428313 PIK3CD-AS1Q5SR53 167 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 TACC2O95359 2948 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 TRAV23DV6A0A075B6W5 121 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 KNCNA6PVL3 124 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 NCR3O14931 201 aa11.56□□□□□ -0.56
C9orf3-206ENST00000428313 H3BUA1 57 aa11.55□□□□□ -0.56
C9orf3-206ENST00000428313 SMIM11BQ8TCY0 68 aa11.55□□□□□ -0.56
C9orf3-206ENST00000428313 PROK1P58294 105 aa11.55□□□□□ -0.56
C9orf3-206ENST00000428313 CNOT1A5YKK6 2376 aaKnown RBP11.54□□□□□ -0.56
C9orf3-206ENST00000428313 IGKV2-28A0A075B6P5 120 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 IGHV3-73A0A0B4J1V6 119 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 IGKV2D-28P01615 120 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 MOB4Q9Y3A3 225 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
C9orf3-206ENST00000428313 TRAV7A0A075B6U4 112 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 K7EMT4 169 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 LY6HO94772 140 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 SAA4P35542 130 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
C9orf3-206ENST00000428313 LOC400499M0QZD8 3231 aa11.52□□□□□ -0.56
C9orf3-206ENST00000428313 LECT2O14960 151 aa11.52□□□□□ -0.56
C9orf3-206ENST00000428313 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.57
C9orf3-206ENST00000428313 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
C9orf3-206ENST00000428313 FP248Q71RG6 208 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-206ENST00000428313 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
C9orf3-206ENST00000428313 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
C9orf3-206ENST00000428313 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
C9orf3-206ENST00000428313 SS18Q15532 418 aa11.51□□□□□ -0.57
C9orf3-206ENST00000428313 JMJD7-PLA2G4BH0Y9G9 81 aa11.51□□□□□ -0.57
C9orf3-206ENST00000428313 FAM19A1Q7Z5A9 133 aa11.51□□□□□ -0.57
C9orf3-206ENST00000428313 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
C9orf3-206ENST00000428313 NCOR1O75376 2440 aa11.5□□□□□ -0.57
C9orf3-206ENST00000428313 FBXL19-AS1Q494R0 122 aa11.5□□□□□ -0.57
C9orf3-206ENST00000428313 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
C9orf3-206ENST00000428313 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
C9orf3-206ENST00000428313 IGKV3-20P01619 116 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 IGHV3-11P01762 117 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 SNRPD3P62318 126 aaKnown RBP11.49□□□□□ -0.57
C9orf3-206ENST00000428313 Q6ZSN1 163 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 Q8NA96 180 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 Q9UF83 564 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
C9orf3-206ENST00000428313 CACNA1BQ00975 2339 aa11.48□□□□□ -0.57
C9orf3-206ENST00000428313 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
C9orf3-206ENST00000428313 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
C9orf3-206ENST00000428313 V9GYY9 64 aa11.48□□□□□ -0.57
C9orf3-206ENST00000428313 IGHV3-53P01767 116 aa11.47□□□□□ -0.57
C9orf3-206ENST00000428313 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
C9orf3-206ENST00000428313 AVPP01185 164 aa11.47□□□□□ -0.57
C9orf3-206ENST00000428313 ATP5EP56381 51 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-206ENST00000428313 SEC61GP60059 68 aa11.47□□□□□ -0.57
C9orf3-206ENST00000428313 UBL5Q9BZL1 73 aa11.47□□□□□ -0.57
C9orf3-206ENST00000428313 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
C9orf3-206ENST00000428313 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
C9orf3-206ENST00000428313 PCNX1Q96RV3 2341 aa11.46□□□□□ -0.58
C9orf3-206ENST00000428313 K7EQG2 157 aa11.45□□□□□ -0.58
C9orf3-206ENST00000428313 NDUFC1O43677 76 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 EDN2P20800 178 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 WFDC11Q8NEX6 87 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 PIEZO2Q9H5I5 2752 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 LINC01560Q8TB33 94 aa11.44□□□□□ -0.58
C9orf3-206ENST00000428313 SLPIP03973 132 aa11.43□□□□□ -0.58
C9orf3-206ENST00000428313 LY6G6DO95868 133 aa11.42□□□□□ -0.58
C9orf3-206ENST00000428313 CCL18P55774 89 aa11.42□□□□□ -0.58
C9orf3-206ENST00000428313 BLCAPP62952 87 aa11.42□□□□□ -0.58
C9orf3-206ENST00000428313 C11orf71Q6IPW1 123 aa11.42□□□□□ -0.58
C9orf3-206ENST00000428313 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
C9orf3-206ENST00000428313 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 DOPEY2Q9Y3R5 2298 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 F8WEM9 126 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 LINC00482Q8N8I6 264 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 Q96MF0 132 aa11.4□□□□□ -0.58
C9orf3-206ENST00000428313 APC2O95996 2303 aa11.4□□□□□ -0.59
C9orf3-206ENST00000428313 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
C9orf3-206ENST00000428313 C11orf72Q8NBR9 251 aa11.39□□□□□ -0.59
C9orf3-206ENST00000428313 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
C9orf3-206ENST00000428313 LINC00158P58513 81 aa11.38□□□□□ -0.59
C9orf3-206ENST00000428313 BRK1Q8WUW1 75 aa11.38□□□□□ -0.59
C9orf3-206ENST00000428313 PTPRQQ9UMZ3 2332 aa11.38□□□□□ -0.59
C9orf3-206ENST00000428313 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
C9orf3-206ENST00000428313 RBM3P98179 157 aaKnown RBP11.38□□□□□ -0.59
C9orf3-206ENST00000428313 RMI2Q96E14 147 aa11.38□□□□□ -0.59
C9orf3-206ENST00000428313 TRBV6-4A0A1B0GX49 114 aa11.37□□□□□ -0.59
C9orf3-206ENST00000428313 HTN1P15515 57 aa11.37□□□□□ -0.59
C9orf3-206ENST00000428313 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
C9orf3-206ENST00000428313 CFHR3Q02985 330 aa11.37□□□□□ -0.59
C9orf3-206ENST00000428313 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
C9orf3-206ENST00000428313 CACNA1HO95180 2353 aa11.36□□□□□ -0.59
C9orf3-206ENST00000428313 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms