RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
SLC6A1-202ENST00000425938 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
SLC6A1-202ENST00000425938 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
SLC6A1-202ENST00000425938 MRPL52Q86TS9 123 aaKnown RBP11.32□□□□□ -0.6
SLC6A1-202ENST00000425938 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
SLC6A1-202ENST00000425938 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 A0A1B0GXF2 115 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 MT-ND4LP03901 98 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 PLA2G1BP04054 148 aaKnown RBP11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 CLLU1Q5K131 121 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 LINC00528Q8N1L1 170 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 HERC1Q15751 4861 aa11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-202ENST00000425938 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
SLC6A1-202ENST00000425938 CDC42SE2Q9NRR3 84 aa11.3□□□□□ -0.6
SLC6A1-202ENST00000425938 D6R8Y8 96 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 TCAPO15273 167 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 PPBPP02775 128 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 ANAPC16Q96DE5 110 aa11.29□□□□□ -0.6
SLC6A1-202ENST00000425938 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 XCL1P47992 114 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 SS18Q15532 418 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 MYCBP2O75592 4640 aa11.28□□□□□ -0.6
SLC6A1-202ENST00000425938 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
SLC6A1-202ENST00000425938 PHOX2AO14813 284 aa11.27□□□□□ -0.61
SLC6A1-202ENST00000425938 CCL25O15444 150 aa11.27□□□□□ -0.61
SLC6A1-202ENST00000425938 FOXI1Q12951 378 aa11.27□□□□□ -0.61
SLC6A1-202ENST00000425938 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
SLC6A1-202ENST00000425938 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
SLC6A1-202ENST00000425938 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
SLC6A1-202ENST00000425938 SMIM2Q9BVW6 85 aa11.26□□□□□ -0.61
SLC6A1-202ENST00000425938 UBE2D4Q9Y2X8 147 aa11.26□□□□□ -0.61
SLC6A1-202ENST00000425938 DMBT1Q9UGM3 2413 aaPredicted RBP11.25□□□□□ -0.61
SLC6A1-202ENST00000425938 NPYP01303 97 aa11.25□□□□□ -0.61
SLC6A1-202ENST00000425938 HIGD2BQ4VC39 106 aa11.25□□□□□ -0.61
SLC6A1-202ENST00000425938 GVQW2A0A096LPI5 108 aaPredicted RBP11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 SLPIP03973 132 aa11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 UQCC3Q6UW78 93 aa11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
SLC6A1-202ENST00000425938 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
SLC6A1-202ENST00000425938 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
SLC6A1-202ENST00000425938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
SLC6A1-202ENST00000425938 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
SLC6A1-202ENST00000425938 IFITM2Q01629 132 aa11.22□□□□□ -0.61
SLC6A1-202ENST00000425938 RAB5AP20339 215 aa11.21□□□□□ -0.61
SLC6A1-202ENST00000425938 DPH3Q96FX2 82 aa11.21□□□□□ -0.61
SLC6A1-202ENST00000425938 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
SLC6A1-202ENST00000425938 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
SLC6A1-202ENST00000425938 Q6ZUT4 128 aa11.2□□□□□ -0.62
SLC6A1-202ENST00000425938 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
SLC6A1-202ENST00000425938 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
SLC6A1-202ENST00000425938 TMEM218A2RU14 115 aa11.19□□□□□ -0.62
SLC6A1-202ENST00000425938 RPL39P62891 51 aaKnown RBP11.19□□□□□ -0.62
SLC6A1-202ENST00000425938 PANO1I0J062 215 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 COX7A2LO14548 114 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 MALP21145 153 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 IMMP2LQ96T52 175 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
SLC6A1-202ENST00000425938 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
SLC6A1-202ENST00000425938 COX6A2Q02221 97 aa11.17□□□□□ -0.62
SLC6A1-202ENST00000425938 CTDSP1Q9GZU7 261 aa11.17□□□□□ -0.62
SLC6A1-202ENST00000425938 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
SLC6A1-202ENST00000425938 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
SLC6A1-202ENST00000425938 SPACA4Q8TDM5 124 aa11.16□□□□□ -0.62
SLC6A1-202ENST00000425938 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 COMMD7Q86VX2 200 aa11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
SLC6A1-202ENST00000425938 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
SLC6A1-202ENST00000425938 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
SLC6A1-202ENST00000425938 TRAV9-1A0A075B6T8 112 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 A0A087WYN8 130 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 J3QL48 77 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 APOMO95445 188 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 C5orf38Q86SI9 138 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 Q8N8P6 123 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 PRSS3P2Q8NHM4 247 aa11.13□□□□□ -0.63
SLC6A1-202ENST00000425938 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
SLC6A1-202ENST00000425938 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
SLC6A1-202ENST00000425938 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-202ENST00000425938 MAJINQ3KP22 176 aa11.12□□□□□ -0.63
SLC6A1-202ENST00000425938 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-202ENST00000425938 S100PP25815 95 aa11.11□□□□□ -0.63
SLC6A1-202ENST00000425938 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms