RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 CKS2P33552 79 aa12.65□□□□□ -0.38
FBXO28-202ENST00000424254 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.38
FBXO28-202ENST00000424254 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
FBXO28-202ENST00000424254 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
FBXO28-202ENST00000424254 TRBV24-1A0A075B6N3 115 aa12.64□□□□□ -0.39
FBXO28-202ENST00000424254 S100A8P05109 93 aa12.64□□□□□ -0.39
FBXO28-202ENST00000424254 FOXI1Q12951 378 aa12.64□□□□□ -0.39
FBXO28-202ENST00000424254 CLLU1Q5K131 121 aa12.64□□□□□ -0.39
FBXO28-202ENST00000424254 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
FBXO28-202ENST00000424254 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
FBXO28-202ENST00000424254 LINC00959A0A1B0GUT2 108 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 D6R8Y8 96 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 F8W036 122 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 PANO1I0J062 215 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 XCL1P47992 114 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 PNRC1Q12796 327 aaPredicted RBP12.63□□□□□ -0.39
FBXO28-202ENST00000424254 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
FBXO28-202ENST00000424254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.63□□□□□ -0.39
FBXO28-202ENST00000424254 CCL25O15444 150 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 PLA2G1BP04054 148 aaKnown RBP12.62□□□□□ -0.39
FBXO28-202ENST00000424254 HIGD2BQ4VC39 106 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 CFAP161Q6P656 301 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 ZNF664Q8N3J9 261 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 RPL32P62910 135 aaKnown RBP12.62□□□□□ -0.39
FBXO28-202ENST00000424254 IFITM2Q01629 132 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 UBE2D4Q9Y2X8 147 aa12.62□□□□□ -0.39
FBXO28-202ENST00000424254 NPYP01303 97 aa12.61□□□□□ -0.39
FBXO28-202ENST00000424254 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
FBXO28-202ENST00000424254 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
FBXO28-202ENST00000424254 MT-ND4LP03901 98 aa12.6□□□□□ -0.39
FBXO28-202ENST00000424254 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
FBXO28-202ENST00000424254 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
FBXO28-202ENST00000424254 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
FBXO28-202ENST00000424254 GVQW2A0A096LPI5 108 aaPredicted RBP12.59□□□□□ -0.39
FBXO28-202ENST00000424254 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
FBXO28-202ENST00000424254 SS18Q15532 418 aa12.59□□□□□ -0.39
FBXO28-202ENST00000424254 RNASE13Q5GAN3 156 aaKnown RBP12.59□□□□□ -0.39
FBXO28-202ENST00000424254 ANAPC16Q96DE5 110 aa12.59□□□□□ -0.39
FBXO28-202ENST00000424254 PPBPP02775 128 aa12.58□□□□□ -0.4
FBXO28-202ENST00000424254 FLG2Q5D862 2391 aaPredicted RBP12.57□□□□□ -0.4
FBXO28-202ENST00000424254 PHOX2AO14813 284 aa12.57□□□□□ -0.4
FBXO28-202ENST00000424254 CIRBPQ14011 172 aaKnown RBP12.57□□□□□ -0.4
FBXO28-202ENST00000424254 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
FBXO28-202ENST00000424254 Q6ZUT4 128 aa12.57□□□□□ -0.4
FBXO28-202ENST00000424254 ORMDL3Q8N138 153 aa12.57□□□□□ -0.4
FBXO28-202ENST00000424254 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 RPL39P62891 51 aaKnown RBP12.56□□□□□ -0.4
FBXO28-202ENST00000424254 SMAGPQ0VAQ4 97 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 TMEM18Q96B42 140 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 TIMM21Q9BVV7 248 aa12.56□□□□□ -0.4
FBXO28-202ENST00000424254 TCAPO15273 167 aa12.55□□□□□ -0.4
FBXO28-202ENST00000424254 PRELID3AQ96N28 172 aa12.55□□□□□ -0.4
FBXO28-202ENST00000424254 TRAV13-1A0A0B4J241 112 aa12.54□□□□□ -0.4
FBXO28-202ENST00000424254 IGHV1-58A0A0C4DH39 117 aa12.54□□□□□ -0.4
FBXO28-202ENST00000424254 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
FBXO28-202ENST00000424254 UQCC3Q6UW78 93 aa12.53□□□□□ -0.4
FBXO28-202ENST00000424254 FAM104AQ969W3 186 aa12.53□□□□□ -0.4
FBXO28-202ENST00000424254 LINC00526Q96FQ7 95 aa12.53□□□□□ -0.4
FBXO28-202ENST00000424254 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
FBXO28-202ENST00000424254 COX6A2Q02221 97 aa12.52□□□□□ -0.41
FBXO28-202ENST00000424254 SPACA4Q8TDM5 124 aa12.52□□□□□ -0.41
FBXO28-202ENST00000424254 PRSS3P2Q8NHM4 247 aa12.51□□□□□ -0.41
FBXO28-202ENST00000424254 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
FBXO28-202ENST00000424254 HERC1Q15751 4861 aa12.51□□□□□ -0.41
FBXO28-202ENST00000424254 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
FBXO28-202ENST00000424254 A0A087WYN8 130 aa12.49□□□□□ -0.41
FBXO28-202ENST00000424254 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
FBXO28-202ENST00000424254 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
FBXO28-202ENST00000424254 LAMTOR2Q9Y2Q5 125 aa12.49□□□□□ -0.41
FBXO28-202ENST00000424254 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
FBXO28-202ENST00000424254 COX7A2LO14548 114 aa12.48□□□□□ -0.41
FBXO28-202ENST00000424254 RAB5AP20339 215 aa12.48□□□□□ -0.41
FBXO28-202ENST00000424254 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
FBXO28-202ENST00000424254 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
FBXO28-202ENST00000424254 MALP21145 153 aa12.47□□□□□ -0.41
FBXO28-202ENST00000424254 MRPS36P82909 103 aaKnown RBP12.47□□□□□ -0.41
FBXO28-202ENST00000424254 C5orf38Q86SI9 138 aa12.47□□□□□ -0.41
FBXO28-202ENST00000424254 IMMP2LQ96T52 175 aa12.47□□□□□ -0.41
FBXO28-202ENST00000424254 IGKV2-24A0A0C4DH68 120 aa12.46□□□□□ -0.41
FBXO28-202ENST00000424254 ZNF561-AS1K7EIQ3 104 aa12.46□□□□□ -0.41
FBXO28-202ENST00000424254 CARD19Q96LW7 228 aa12.46□□□□□ -0.41
FBXO28-202ENST00000424254 MAP1LC3AQ9H492 121 aa12.46□□□□□ -0.41
FBXO28-202ENST00000424254 SYCNQ0VAF6 134 aa12.45□□□□□ -0.42
FBXO28-202ENST00000424254 COMMD7Q86VX2 200 aa12.45□□□□□ -0.42
FBXO28-202ENST00000424254 PLAC8Q9NZF1 115 aa12.45□□□□□ -0.42
FBXO28-202ENST00000424254 IGLV4-69A0A075B6H9 119 aa12.44□□□□□ -0.42
FBXO28-202ENST00000424254 A0A096LNI7 61 aa12.44□□□□□ -0.42
FBXO28-202ENST00000424254 MAJINQ3KP22 176 aa12.44□□□□□ -0.42
FBXO28-202ENST00000424254 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
FBXO28-202ENST00000424254 CTDSP1Q9GZU7 261 aa12.44□□□□□ -0.42
FBXO28-202ENST00000424254 IFITM10A6NMD0 228 aa12.43□□□□□ -0.42
FBXO28-202ENST00000424254 HNRNPA3P51991 378 aaKnown RBP12.43□□□□□ -0.42
FBXO28-202ENST00000424254 Q8N8P6 123 aa12.43□□□□□ -0.42
FBXO28-202ENST00000424254 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
FBXO28-202ENST00000424254 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
FBXO28-202ENST00000424254 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms