RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
USP49-204ENST00000423567 C7orf77A4D0Y5 90 aa7.19□□□□□ -1.26
USP49-204ENST00000423567 USP17L23D6RBM5 183 aa7.19□□□□□ -1.26
USP49-204ENST00000423567 NRACQ8N912 160 aa7.19□□□□□ -1.26
USP49-204ENST00000423567 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
USP49-204ENST00000423567 A0A1B0GXF2 115 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 TCAPO15273 167 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 PPBPP02775 128 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 Q8N1X5 172 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 OR5A1Q8NGJ0 315 aa7.18□□□□□ -1.26
USP49-204ENST00000423567 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
USP49-204ENST00000423567 TMEM218A2RU14 115 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 D6R8Y8 96 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 ESDP10768 282 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 CLRN3Q8NCR9 226 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 TMEM18Q96B42 140 aa7.17□□□□□ -1.26
USP49-204ENST00000423567 TRBV24-1A0A075B6N3 115 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 PHOX2AO14813 284 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 XGP55808 180 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
USP49-204ENST00000423567 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 COMMD7Q86VX2 200 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 ORMDL3Q8N138 153 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
USP49-204ENST00000423567 GAGE12HA6NDE8 117 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 PRSS1P07477 247 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 MRPL52Q86TS9 123 aaKnown RBP7.15□□□□□ -1.26
USP49-204ENST00000423567 CHCHD10Q8WYQ3 142 aaPredicted RBP7.15□□□□□ -1.26
USP49-204ENST00000423567 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 SEC11CQ9BY50 192 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 CTDSP1Q9GZU7 261 aa7.15□□□□□ -1.26
USP49-204ENST00000423567 HSPG2P98160 4391 aa7.15□□□□□ -1.27
USP49-204ENST00000423567 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 EPM2AB3EWF7 344 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 H3BS24 57 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 NPYP01303 97 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 ADCYAP1P18509 176 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 SS18Q15532 418 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
USP49-204ENST00000423567 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.13□□□□□ -1.27
USP49-204ENST00000423567 RAB5AP20339 215 aa7.13□□□□□ -1.27
USP49-204ENST00000423567 LINC01620Q4KN68 170 aa7.13□□□□□ -1.27
USP49-204ENST00000423567 CDC42SE2Q9NRR3 84 aa7.13□□□□□ -1.27
USP49-204ENST00000423567 LAMTOR2Q9Y2Q5 125 aa7.13□□□□□ -1.27
USP49-204ENST00000423567 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 S100PP25815 95 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 XCL1P47992 114 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 HAMPP81172 84 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 FAM30AQ9NZY2 134 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 UBE2D4Q9Y2X8 147 aa7.12□□□□□ -1.27
USP49-204ENST00000423567 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
USP49-204ENST00000423567 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 CCL25O15444 150 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
USP49-204ENST00000423567 CNBPP62633 177 aaKnown RBP7.11□□□□□ -1.27
USP49-204ENST00000423567 Q6ZSA8 131 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 TIMM21Q9BVV7 248 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
USP49-204ENST00000423567 C1orf196B1AJZ1 125 aa7.1□□□□□ -1.27
USP49-204ENST00000423567 Q5VSD8 79 aa7.1□□□□□ -1.27
USP49-204ENST00000423567 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
USP49-204ENST00000423567 C9orf163Q8N9P6 203 aa7.1□□□□□ -1.27
USP49-204ENST00000423567 SPANXA1Q9NS26 97 aa7.1□□□□□ -1.27
USP49-204ENST00000423567 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
USP49-204ENST00000423567 FOXI1Q12951 378 aa7.09□□□□□ -1.27
USP49-204ENST00000423567 C15orf56Q8N910 161 aa7.09□□□□□ -1.27
USP49-204ENST00000423567 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
USP49-204ENST00000423567 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 MALP21145 153 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 IFI27P40305 119 aaPredicted RBP7.08□□□□□ -1.28
USP49-204ENST00000423567 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
USP49-204ENST00000423567 RHEBQ15382 184 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 NDUFA5Q16718 116 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
USP49-204ENST00000423567 Q6ZUT4 128 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 RPS10P5Q9NQ39 176 aa7.08□□□□□ -1.28
USP49-204ENST00000423567 CARHSP1Q9Y2V2 147 aaKnown RBP7.08□□□□□ -1.28
USP49-204ENST00000423567 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 IGHV3-64A0A075B6Q5 118 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 GVQW2A0A096LPI5 108 aaPredicted RBP7.07□□□□□ -1.28
USP49-204ENST00000423567 COX7A2LO14548 114 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 COX19Q49B96 90 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 Q8N8P6 123 aa7.07□□□□□ -1.28
USP49-204ENST00000423567 PCLOQ9Y6V0 5065 aa7.06□□□□□ -1.28
USP49-204ENST00000423567 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
USP49-204ENST00000423567 ZNF561-AS1K7EIQ3 104 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms