RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
USB1-202ENST00000423271 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 APCSP02743 223 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 MIAQ16674 131 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 LINC00269Q8N2A0 174 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 PRR34Q9NV39 138 aa9.89□□□□□ -0.83
USB1-202ENST00000423271 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 VCYO14598 125 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 PPBPP02775 128 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 C20orf78Q9BR46 151 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
USB1-202ENST00000423271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
USB1-202ENST00000423271 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
USB1-202ENST00000423271 UBE2L6O14933 153 aa9.87□□□□□ -0.83
USB1-202ENST00000423271 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
USB1-202ENST00000423271 PRELID3AQ96N28 172 aa9.87□□□□□ -0.83
USB1-202ENST00000423271 LRP1Q07954 4544 aaKnown RBP9.86□□□□□ -0.83
USB1-202ENST00000423271 PHOX2AO14813 284 aa9.86□□□□□ -0.83
USB1-202ENST00000423271 ESDP10768 282 aa9.86□□□□□ -0.83
USB1-202ENST00000423271 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
USB1-202ENST00000423271 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 PRSS1P07477 247 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 FCER1GP30273 86 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
USB1-202ENST00000423271 REG3AQ06141 175 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
USB1-202ENST00000423271 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
USB1-202ENST00000423271 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
USB1-202ENST00000423271 KIAA1644Q3SXP7 199 aa9.84□□□□□ -0.83
USB1-202ENST00000423271 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
USB1-202ENST00000423271 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
USB1-202ENST00000423271 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.83
USB1-202ENST00000423271 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
USB1-202ENST00000423271 H7C423 109 aa9.82□□□□□ -0.84
USB1-202ENST00000423271 FGF6P10767 208 aa9.82□□□□□ -0.84
USB1-202ENST00000423271 COX19Q49B96 90 aa9.82□□□□□ -0.84
USB1-202ENST00000423271 AMMECR1LQ6DCA0 310 aa9.82□□□□□ -0.84
USB1-202ENST00000423271 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
USB1-202ENST00000423271 LOC389332A0A1B0GUA5 103 aa9.81□□□□□ -0.84
USB1-202ENST00000423271 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
USB1-202ENST00000423271 MAP1LC3AQ9H492 121 aa9.81□□□□□ -0.84
USB1-202ENST00000423271 TCAPO15273 167 aa9.8□□□□□ -0.84
USB1-202ENST00000423271 MT-ND6P03923 174 aa9.8□□□□□ -0.84
USB1-202ENST00000423271 KRTAP10-4P60372 401 aaPredicted RBP9.8□□□□□ -0.84
USB1-202ENST00000423271 CBLN2Q8IUK8 224 aa9.8□□□□□ -0.84
USB1-202ENST00000423271 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
USB1-202ENST00000423271 MRPL18Q9H0U6 180 aaKnown RBP9.8□□□□□ -0.84
USB1-202ENST00000423271 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
USB1-202ENST00000423271 FABP9Q0Z7S8 132 aa9.79□□□□□ -0.84
USB1-202ENST00000423271 MRPL52Q86TS9 123 aaKnown RBP9.79□□□□□ -0.84
USB1-202ENST00000423271 TRAV8-4A0A0B4J246 113 aa9.78□□□□□ -0.84
USB1-202ENST00000423271 DGAT2L7PQ6IED9 249 aa9.78□□□□□ -0.84
USB1-202ENST00000423271 Q8N8P6 123 aa9.78□□□□□ -0.84
USB1-202ENST00000423271 C9orf163Q8N9P6 203 aa9.78□□□□□ -0.84
USB1-202ENST00000423271 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
USB1-202ENST00000423271 IGKV3OR2-268A0A0C4DH90 116 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 PANO1I0J062 215 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 RAB5AP20339 215 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
USB1-202ENST00000423271 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
USB1-202ENST00000423271 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 TRAPPC1Q9Y5R8 145 aa9.77□□□□□ -0.85
USB1-202ENST00000423271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.77□□□□□ -0.85
USB1-202ENST00000423271 hDV102S1A0JD36 115 aa9.76□□□□□ -0.85
USB1-202ENST00000423271 J3QL48 77 aa9.76□□□□□ -0.85
USB1-202ENST00000423271 TMEM18Q96B42 140 aa9.76□□□□□ -0.85
USB1-202ENST00000423271 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
USB1-202ENST00000423271 IFI27P40305 119 aaPredicted RBP9.75□□□□□ -0.85
USB1-202ENST00000423271 CNBPP62633 177 aaKnown RBP9.75□□□□□ -0.85
USB1-202ENST00000423271 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
USB1-202ENST00000423271 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
USB1-202ENST00000423271 HMCN2Q8NDA2 5059 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 GAGE12HA6NDE8 117 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 SLPIP03973 132 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 SMAGPQ0VAQ4 97 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 ZNF664Q8N3J9 261 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
USB1-202ENST00000423271 RNASE13Q5GAN3 156 aaKnown RBP9.73□□□□□ -0.85
USB1-202ENST00000423271 Q6ZUT4 128 aa9.73□□□□□ -0.85
USB1-202ENST00000423271 C15orf56Q8N910 161 aa9.73□□□□□ -0.85
USB1-202ENST00000423271 CSDC2Q9Y534 153 aaKnown RBP9.73□□□□□ -0.85
USB1-202ENST00000423271 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
USB1-202ENST00000423271 ORMDL2Q53FV1 153 aa9.72□□□□□ -0.85
USB1-202ENST00000423271 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
USB1-202ENST00000423271 K7EMI3 77 aa9.71□□□□□ -0.86
USB1-202ENST00000423271 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.86
USB1-202ENST00000423271 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
USB1-202ENST00000423271 CHCHD10Q8WYQ3 142 aaPredicted RBP9.71□□□□□ -0.86
USB1-202ENST00000423271 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
USB1-202ENST00000423271 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
USB1-202ENST00000423271 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms