RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 SNCGO76070 127 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 C9orf66Q5T8R8 295 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
SNX20-203ENST00000423026 TP53TG1Q9Y2A0 90 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 RS1O15537 224 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 TMEM141Q96I45 108 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
SNX20-203ENST00000423026 HIVEP1P15822 2718 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 TRGV1A0A0A0MS02 117 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 LOC107984156A0A0G2JMH3 177 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 Q6Q795 121 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 ARL17AQ8IVW1 177 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.53□□□□□ -1.36
SNX20-203ENST00000423026 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
SNX20-203ENST00000423026 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.36
SNX20-203ENST00000423026 BAALCQ8WXS3 180 aa6.52□□□□□ -1.36
SNX20-203ENST00000423026 C16orf74Q96GX8 76 aa6.52□□□□□ -1.36
SNX20-203ENST00000423026 DNAJC30Q96LL9 226 aa6.52□□□□□ -1.36
SNX20-203ENST00000423026 TIMM17AQ99595 171 aa6.52□□□□□ -1.36
SNX20-203ENST00000423026 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
SNX20-203ENST00000423026 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
SNX20-203ENST00000423026 GIG44P09565 113 aaPredicted RBP6.52□□□□□ -1.37
SNX20-203ENST00000423026 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
SNX20-203ENST00000423026 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
SNX20-203ENST00000423026 TSHBP01222 138 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
SNX20-203ENST00000423026 SRSF9Q13242 221 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNX20-203ENST00000423026 PAPPA-AS1Q5QFB9 102 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 PRADC1Q9BSG0 188 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 ZNF815PA8K554 130 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 SCGB1C2P0DMR2 95 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 P0DMU3 169 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 DAZ2Q13117 558 aaKnown RBP6.51□□□□□ -1.37
SNX20-203ENST00000423026 PMVKQ15126 192 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 SCGB1D4Q6XE38 83 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
SNX20-203ENST00000423026 JMJD1CQ15652 2540 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 TCL1BO95988 128 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 Q6ZSN1 163 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
SNX20-203ENST00000423026 F8P00451 2351 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
SNX20-203ENST00000423026 Q6ZTI0 123 aa6.49□□□□□ -1.37
SNX20-203ENST00000423026 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
SNX20-203ENST00000423026 HERVK_113P61574 105 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
SNX20-203ENST00000423026 C5orf47Q569G3 176 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
SNX20-203ENST00000423026 OVOL2Q9BRP0 275 aa6.48□□□□□ -1.37
SNX20-203ENST00000423026 A0A0J9YY99 117 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 SLC25A20O43772 301 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 PPDPFQ9H3Y8 114 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 PRO1854Q9UHT4 67 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 PYGO1Q9Y3Y4 419 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 NIPBLQ6KC79 2804 aaeCLIP6.47□□□□□ -1.37
SNX20-203ENST00000423026 K7EQD1 137 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 CFC1P0CG37 223 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
SNX20-203ENST00000423026 PLAC8L1A1L4L8 177 aa6.46□□□□□ -1.38
SNX20-203ENST00000423026 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
SNX20-203ENST00000423026 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
SNX20-203ENST00000423026 SLC25A29Q8N8R3 303 aa6.46□□□□□ -1.38
SNX20-203ENST00000423026 Q9UF83 564 aa6.46□□□□□ -1.38
SNX20-203ENST00000423026 IGLV4-69A0A075B6H9 119 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 IGHV3-38A0A0C4DH36 116 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
SNX20-203ENST00000423026 WFDC9Q8NEX5 89 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 SPATA3Q8NHX4 192 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 EMP1P54849 157 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 MRPL23Q16540 153 aaKnown RBP6.45□□□□□ -1.38
SNX20-203ENST00000423026 TMEM170BQ5T4T1 132 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
SNX20-203ENST00000423026 OPRPNQ99935 248 aaPredicted RBP6.45□□□□□ -1.38
SNX20-203ENST00000423026 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
SNX20-203ENST00000423026 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
SNX20-203ENST00000423026 APOC4P55056 127 aa6.44□□□□□ -1.38
SNX20-203ENST00000423026 KIR2DL5BQ8NHK3 375 aa6.44□□□□□ -1.38
SNX20-203ENST00000423026 C9JAW5 83 aa6.44□□□□□ -1.38
SNX20-203ENST00000423026 C15orf53Q8NAA6 179 aa6.44□□□□□ -1.38
SNX20-203ENST00000423026 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
SNX20-203ENST00000423026 ATRQ13535 2644 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms