RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 J3QL48 77 aa14.2□□□□□ -0.14
TRAF4-204ENST00000422344 PNRC1Q12796 327 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-204ENST00000422344 CFAP161Q6P656 301 aa14.2□□□□□ -0.14
TRAF4-204ENST00000422344 CHCHD10Q8WYQ3 142 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-204ENST00000422344 CHAC1Q9BUX1 264 aa14.2□□□□□ -0.14
TRAF4-204ENST00000422344 SMAGPQ0VAQ4 97 aa14.18□□□□□ -0.14
TRAF4-204ENST00000422344 C9orf163Q8N9P6 203 aa14.18□□□□□ -0.14
TRAF4-204ENST00000422344 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-204ENST00000422344 CLLU1Q5K131 121 aa14.17□□□□□ -0.14
TRAF4-204ENST00000422344 MRPL52Q86TS9 123 aaKnown RBP14.17□□□□□ -0.14
TRAF4-204ENST00000422344 LINC00528Q8N1L1 170 aa14.17□□□□□ -0.14
TRAF4-204ENST00000422344 C20orf78Q9BR46 151 aa14.17□□□□□ -0.14
TRAF4-204ENST00000422344 DNAH8Q96JB1 4490 aa14.17□□□□□ -0.14
TRAF4-204ENST00000422344 A0A1B0GXF2 115 aa14.16□□□□□ -0.14
TRAF4-204ENST00000422344 MT-ND4LP03901 98 aa14.16□□□□□ -0.14
TRAF4-204ENST00000422344 PLA2G1BP04054 148 aaKnown RBP14.16□□□□□ -0.14
TRAF4-204ENST00000422344 CNBPP62633 177 aaKnown RBP14.16□□□□□ -0.14
TRAF4-204ENST00000422344 ATP5L2Q7Z4Y8 100 aa14.16□□□□□ -0.14
TRAF4-204ENST00000422344 D6R8Y8 96 aa14.15□□□□□ -0.14
TRAF4-204ENST00000422344 CIRBP-AS1Q8TBR5 109 aa14.15□□□□□ -0.14
TRAF4-204ENST00000422344 TRBV24-1A0A075B6N3 115 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 TNFRSF6BO95407 300 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 XCL1P47992 114 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 SS18Q15532 418 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 ZNF664Q8N3J9 261 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 TMEM18Q96B42 140 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 ANAPC16Q96DE5 110 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 CDC42SE2Q9NRR3 84 aa14.14□□□□□ -0.15
TRAF4-204ENST00000422344 LINC00959A0A1B0GUT2 108 aa14.13□□□□□ -0.15
TRAF4-204ENST00000422344 TCAPO15273 167 aa14.13□□□□□ -0.15
TRAF4-204ENST00000422344 PPBPP02775 128 aa14.13□□□□□ -0.15
TRAF4-204ENST00000422344 C15orf56Q8N910 161 aa14.13□□□□□ -0.15
TRAF4-204ENST00000422344 CCL25O15444 150 aa14.12□□□□□ -0.15
TRAF4-204ENST00000422344 RPL32P62910 135 aaKnown RBP14.12□□□□□ -0.15
TRAF4-204ENST00000422344 IGHV3-64A0A075B6Q5 118 aa14.11□□□□□ -0.15
TRAF4-204ENST00000422344 FOXI1Q12951 378 aa14.11□□□□□ -0.15
TRAF4-204ENST00000422344 HIGD2BQ4VC39 106 aa14.11□□□□□ -0.15
TRAF4-204ENST00000422344 SMIM2Q9BVW6 85 aa14.11□□□□□ -0.15
TRAF4-204ENST00000422344 PHOX2AO14813 284 aa14.1□□□□□ -0.15
TRAF4-204ENST00000422344 NPYP01303 97 aa14.1□□□□□ -0.15
TRAF4-204ENST00000422344 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
TRAF4-204ENST00000422344 UBE2D4Q9Y2X8 147 aa14.1□□□□□ -0.15
TRAF4-204ENST00000422344 CSDC2Q9Y534 153 aaKnown RBP14.1□□□□□ -0.15
TRAF4-204ENST00000422344 SDIM1Q6ZPB5 146 aa14.09□□□□□ -0.15
TRAF4-204ENST00000422344 UQCC3Q6UW78 93 aa14.08□□□□□ -0.16
TRAF4-204ENST00000422344 TMEM136Q6ZRR5 245 aa14.08□□□□□ -0.16
TRAF4-204ENST00000422344 GVQW2A0A096LPI5 108 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-204ENST00000422344 SLPIP03973 132 aa14.07□□□□□ -0.16
TRAF4-204ENST00000422344 PRELID3AQ96N28 172 aa14.07□□□□□ -0.16
TRAF4-204ENST00000422344 TIMM21Q9BVV7 248 aa14.07□□□□□ -0.16
TRAF4-204ENST00000422344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.07□□□□□ -0.16
TRAF4-204ENST00000422344 C1orf196B1AJZ1 125 aa14.06□□□□□ -0.16
TRAF4-204ENST00000422344 IFITM2Q01629 132 aa14.06□□□□□ -0.16
TRAF4-204ENST00000422344 CD164L2Q6UWJ8 174 aa14.06□□□□□ -0.16
TRAF4-204ENST00000422344 DPH3Q96FX2 82 aa14.06□□□□□ -0.16
TRAF4-204ENST00000422344 IGHV1-58A0A0C4DH39 117 aa14.05□□□□□ -0.16
TRAF4-204ENST00000422344 RNASE13Q5GAN3 156 aaKnown RBP14.05□□□□□ -0.16
TRAF4-204ENST00000422344 KRTAP29-1A8MX34 341 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-204ENST00000422344 RAB5AP20339 215 aa14.04□□□□□ -0.16
TRAF4-204ENST00000422344 Q6ZUT4 128 aa14.04□□□□□ -0.16
TRAF4-204ENST00000422344 TRAV13-1A0A0B4J241 112 aa14.03□□□□□ -0.16
TRAF4-204ENST00000422344 RPL39P62891 51 aaKnown RBP14.03□□□□□ -0.16
TRAF4-204ENST00000422344 TMEM218A2RU14 115 aa14.02□□□□□ -0.17
TRAF4-204ENST00000422344 PANO1I0J062 215 aa14.02□□□□□ -0.17
TRAF4-204ENST00000422344 MALP21145 153 aa14.02□□□□□ -0.17
TRAF4-204ENST00000422344 SPANXA1Q9NS26 97 aa14.02□□□□□ -0.17
TRAF4-204ENST00000422344 LAMTOR2Q9Y2Q5 125 aa14.02□□□□□ -0.17
TRAF4-204ENST00000422344 COX7A2LO14548 114 aa14.01□□□□□ -0.17
TRAF4-204ENST00000422344 ZNF561-AS1K7EIQ3 104 aa14□□□□□ -0.17
TRAF4-204ENST00000422344 ADCYAP1P18509 176 aa14□□□□□ -0.17
TRAF4-204ENST00000422344 IMMP2LQ96T52 175 aa14□□□□□ -0.17
TRAF4-204ENST00000422344 MAP1LC3AQ9H492 121 aa14□□□□□ -0.17
TRAF4-204ENST00000422344 LOC389332A0A1B0GUA5 103 aa13.99□□□□□ -0.17
TRAF4-204ENST00000422344 CHTF8P0CG12 524 aa13.99□□□□□ -0.17
TRAF4-204ENST00000422344 COX6A2Q02221 97 aa13.99□□□□□ -0.17
TRAF4-204ENST00000422344 CIRBPQ14011 172 aaKnown RBP13.99□□□□□ -0.17
TRAF4-204ENST00000422344 CTDSP1Q9GZU7 261 aa13.99□□□□□ -0.17
TRAF4-204ENST00000422344 RPL37AP61513 92 aaKnown RBP13.98□□□□□ -0.17
TRAF4-204ENST00000422344 PKIGQ9Y2B9 76 aa13.98□□□□□ -0.17
TRAF4-204ENST00000422344 LRP1Q07954 4544 aaKnown RBP13.97□□□□□ -0.17
TRAF4-204ENST00000422344 COMMD7Q86VX2 200 aa13.97□□□□□ -0.17
TRAF4-204ENST00000422344 SPACA4Q8TDM5 124 aa13.97□□□□□ -0.17
TRAF4-204ENST00000422344 LINC00526Q96FQ7 95 aa13.97□□□□□ -0.17
TRAF4-204ENST00000422344 IFI27P40305 119 aaPredicted RBP13.96□□□□□ -0.17
TRAF4-204ENST00000422344 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
TRAF4-204ENST00000422344 CARD19Q96LW7 228 aa13.96□□□□□ -0.17
TRAF4-204ENST00000422344 SEC11CQ9BY50 192 aa13.96□□□□□ -0.17
TRAF4-204ENST00000422344 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
TRAF4-204ENST00000422344 PRSS3P2Q8NHM4 247 aa13.95□□□□□ -0.18
TRAF4-204ENST00000422344 OPRPNQ99935 248 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-204ENST00000422344 HMCN2Q8NDA2 5059 aa13.95□□□□□ -0.18
TRAF4-204ENST00000422344 A0A087WYN8 130 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 IGKV2-24A0A0C4DH68 120 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 IFITM10A6NMD0 228 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 APOMO95445 188 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 SYCNQ0VAF6 134 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 SERTAD4-AS1Q5TG53 156 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 C5orf38Q86SI9 138 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 Q8N8P6 123 aa13.94□□□□□ -0.18
TRAF4-204ENST00000422344 S100PP25815 95 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms