RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 KLLNB2CW77 178 aa7.91□□□□□ -1.14
PTCH1-206ENST00000421141 CLUHP3Q96NS8 147 aa7.91□□□□□ -1.14
PTCH1-206ENST00000421141 C11orf86A6NJI1 115 aa7.91□□□□□ -1.14
PTCH1-206ENST00000421141 NCR3O14931 201 aa7.91□□□□□ -1.14
PTCH1-206ENST00000421141 CR1P17927 2039 aa7.91□□□□□ -1.14
PTCH1-206ENST00000421141 OPRPNQ99935 248 aaPredicted RBP7.91□□□□□ -1.14
PTCH1-206ENST00000421141 PROK1P58294 105 aa7.9□□□□□ -1.14
PTCH1-206ENST00000421141 PYY3Q5JQD4 70 aa7.9□□□□□ -1.14
PTCH1-206ENST00000421141 DIRC1Q969H9 104 aa7.9□□□□□ -1.14
PTCH1-206ENST00000421141 CHD9Q3L8U1 2897 aa7.9□□□□□ -1.14
PTCH1-206ENST00000421141 NDUFS5O43920 106 aa7.9□□□□□ -1.14
PTCH1-206ENST00000421141 A0A087WZ39 114 aa7.9□□□□□ -1.15
PTCH1-206ENST00000421141 PLA2G2EQ9NZK7 142 aa7.9□□□□□ -1.15
PTCH1-206ENST00000421141 H0YGX0 51 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 M0QY20 66 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 PIK3CD-AS1Q5SR53 167 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 G3V4G9 280 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 MLST8Q9BVC4 326 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 USP24Q9UPU5 2620 aa7.89□□□□□ -1.15
PTCH1-206ENST00000421141 IGLC6P0CF74 106 aa7.88□□□□□ -1.15
PTCH1-206ENST00000421141 LRCOL1A6NCL2 159 aa7.88□□□□□ -1.15
PTCH1-206ENST00000421141 Q8N2B8 174 aa7.88□□□□□ -1.15
PTCH1-206ENST00000421141 RETNQ9HD89 108 aa7.88□□□□□ -1.15
PTCH1-206ENST00000421141 ODF3L2Q3SX64 289 aa7.88□□□□□ -1.15
PTCH1-206ENST00000421141 MRGPRG-AS1Q2M3A8 158 aa7.87□□□□□ -1.15
PTCH1-206ENST00000421141 Q8N976 141 aa7.87□□□□□ -1.15
PTCH1-206ENST00000421141 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
PTCH1-206ENST00000421141 CEMP1Q6PRD7 247 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-206ENST00000421141 LINC00322Q6ZN03 302 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-206ENST00000421141 CRYBA4P53673 196 aa7.87□□□□□ -1.15
PTCH1-206ENST00000421141 E9PLD3 99 aa7.86□□□□□ -1.15
PTCH1-206ENST00000421141 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
PTCH1-206ENST00000421141 HECTD1Q9ULT8 2610 aa7.86□□□□□ -1.15
PTCH1-206ENST00000421141 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
PTCH1-206ENST00000421141 DAND5Q8N907 189 aa7.86□□□□□ -1.15
PTCH1-206ENST00000421141 CENPEQ02224 2701 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 NDUFB1O75438 58 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 CRIP1P50238 77 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 OCIAD2Q56VL3 154 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 LECT2O14960 151 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 PCP2Q8IVA1 136 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 FLNAP21333 2647 aaKnown RBP7.85□□□□□ -1.15
PTCH1-206ENST00000421141 HAMPP81172 84 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 ITPR3Q14573 2671 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 CFC1BP0CG36 223 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 CFC1P0CG37 223 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 UBE2D1P51668 147 aa7.85□□□□□ -1.15
PTCH1-206ENST00000421141 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
PTCH1-206ENST00000421141 TDRG1Q3Y452 100 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 MUSTN1Q8IVN3 82 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 A0A0C4DFX4 3053 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
PTCH1-206ENST00000421141 IGLV2-8P01709 118 aa7.84□□□□□ -1.16
PTCH1-206ENST00000421141 ODF1Q14990 250 aa7.84□□□□□ -1.16
PTCH1-206ENST00000421141 BAALC-AS2P0C853 105 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 MAJINQ3KP22 176 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 C12orf74Q32Q52 190 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 K7ERJ3 54 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 EDN2P20800 178 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 RBX1P62877 108 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 F8W1H4 67 aa7.83□□□□□ -1.16
PTCH1-206ENST00000421141 COX7BP24311 80 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 SIGMAR1Q99720 223 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 Q6ZTC4 211 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 PRM2P04554 102 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 TRBV27A0A0K0K1C4 114 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 FHL3Q13643 280 aa7.82□□□□□ -1.16
PTCH1-206ENST00000421141 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
PTCH1-206ENST00000421141 ZNF292O60281 2723 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 LOC107984640A0A0U1RRK4 108 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 TRACP01848 142 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 A4D1N5 150 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 TMEM256-PLSCR3K7ERE1 68 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 TRIOO75962 3097 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 PRR9Q5T870 116 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 NPSP0C0P6 89 aa7.81□□□□□ -1.16
PTCH1-206ENST00000421141 IGLV5-52A0A0A0MRZ9 124 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 KRTAP24-1Q3LI83 254 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 TRBV6-5A0A0K0K1A5 114 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 CITED1Q99966 193 aa7.8□□□□□ -1.16
PTCH1-206ENST00000421141 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 IBA57-AS1B1ANH7 110 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 ZNF706Q9Y5V0 76 aaPredicted RBP7.79□□□□□ -1.16
PTCH1-206ENST00000421141 LINC00173Q6ZV60 143 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 CHCHD7Q9BUK0 85 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
PTCH1-206ENST00000421141 PPDPFLQ8WWR9 84 aa7.78□□□□□ -1.16
PTCH1-206ENST00000421141 COA6Q5JTJ3 125 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms