RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ADAMTS9Q9P2N4 1935 aa9.17□□□□□ -0.94
CLCN4-203ENST00000421085 A6NED7 52 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 URB1-AS1Q96HZ7 61 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 Q6ZQY7 126 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 PRR9Q5T870 116 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 IGF2-ASQ6U949 168 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 J3QKU1 62 aa9.16□□□□□ -0.94
CLCN4-203ENST00000421085 Q6JHZ5 121 aa9.15□□□□□ -0.94
CLCN4-203ENST00000421085 KIAA1549Q9HCM3 1950 aa9.15□□□□□ -0.94
CLCN4-203ENST00000421085 DAZAP2Q15038 168 aaPredicted RBP9.15□□□□□ -0.94
CLCN4-203ENST00000421085 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
CLCN4-203ENST00000421085 LY6LH3BQJ8 138 aa9.15□□□□□ -0.95
CLCN4-203ENST00000421085 TNFRSF13BO14836 293 aaPredicted RBP9.14□□□□□ -0.95
CLCN4-203ENST00000421085 LMO4P61968 165 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 POLR2KP53803 58 aaKnown RBP9.14□□□□□ -0.95
CLCN4-203ENST00000421085 TMEM131Q92545 1883 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 KIAA1549LQ6ZVL6 1849 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
CLCN4-203ENST00000421085 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
CLCN4-203ENST00000421085 PLXNB1O43157 2135 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 TANC2Q9HCD6 1990 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 MED12LQ86YW9 2145 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 UBE2D1P51668 147 aa9.13□□□□□ -0.95
CLCN4-203ENST00000421085 FAM30AQ9NZY2 134 aa9.12□□□□□ -0.95
CLCN4-203ENST00000421085 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
CLCN4-203ENST00000421085 PRR15LQ9BU68 103 aa9.12□□□□□ -0.95
CLCN4-203ENST00000421085 MIFP14174 115 aa9.12□□□□□ -0.95
CLCN4-203ENST00000421085 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
CLCN4-203ENST00000421085 LYRM9A8MSI8 78 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 EBI3Q14213 229 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 FBXL19-AS1Q494R0 122 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 DNAJC9-AS1A6NH13 148 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 LINC00526Q96FQ7 95 aa9.11□□□□□ -0.95
CLCN4-203ENST00000421085 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
CLCN4-203ENST00000421085 A0A087WVE0 104 aa9.1□□□□□ -0.95
CLCN4-203ENST00000421085 CRYGDP07320 174 aa9.1□□□□□ -0.95
CLCN4-203ENST00000421085 SERP1Q9Y6X1 66 aa9.1□□□□□ -0.95
CLCN4-203ENST00000421085 IGIPA6NJ69 53 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 PCNX3Q9H6A9 2034 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 LRCOL1A6NCL2 159 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 C9orf85Q96MD7 179 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 Q8NA96 180 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 SOSTDC1Q6X4U4 206 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 CNFNQ9BYD5 112 aa9.09□□□□□ -0.95
CLCN4-203ENST00000421085 A0A087WZ39 114 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 Q6ZSV7 163 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 PCDH15Q96QU1 1955 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 K7ERS5 55 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 C10orf99Q6UWK7 81 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 KLLNB2CW77 178 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 PRM2P04554 102 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
CLCN4-203ENST00000421085 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
CLCN4-203ENST00000421085 UBE2D3P61077 147 aa9.07□□□□□ -0.96
CLCN4-203ENST00000421085 UBE2D2P62837 147 aa9.07□□□□□ -0.96
CLCN4-203ENST00000421085 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
CLCN4-203ENST00000421085 Q6YL49 198 aa9.07□□□□□ -0.96
CLCN4-203ENST00000421085 SYCNQ0VAF6 134 aa9.06□□□□□ -0.96
CLCN4-203ENST00000421085 BBC3Q96PG8 261 aaPredicted RBP9.06□□□□□ -0.96
CLCN4-203ENST00000421085 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
CLCN4-203ENST00000421085 M0R378 163 aa9.06□□□□□ -0.96
CLCN4-203ENST00000421085 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
CLCN4-203ENST00000421085 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
CLCN4-203ENST00000421085 FSTL3O95633 263 aa9.05□□□□□ -0.96
CLCN4-203ENST00000421085 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
CLCN4-203ENST00000421085 NTM-AS1Q6ZSK4 140 aa9.05□□□□□ -0.96
CLCN4-203ENST00000421085 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
CLCN4-203ENST00000421085 DHRS4-AS1Q9P1J3 65 aa9.05□□□□□ -0.96
CLCN4-203ENST00000421085 HCFC1P51610 2035 aa9.04□□□□□ -0.96
CLCN4-203ENST00000421085 Q8N9L7 120 aa9.04□□□□□ -0.96
CLCN4-203ENST00000421085 PPDPFQ9H3Y8 114 aa9.04□□□□□ -0.96
CLCN4-203ENST00000421085 ZNF73O43830 326 aaPredicted RBP9.04□□□□□ -0.96
CLCN4-203ENST00000421085 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
CLCN4-203ENST00000421085 COX17Q14061 63 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.03□□□□□ -0.96
CLCN4-203ENST00000421085 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 WNK1Q9H4A3 2382 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 PRR14LQ5THK1 2151 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 A0A087WYN8 130 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
CLCN4-203ENST00000421085 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.96
CLCN4-203ENST00000421085 Q8N6K4 173 aa9.02□□□□□ -0.97
CLCN4-203ENST00000421085 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
CLCN4-203ENST00000421085 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
CLCN4-203ENST00000421085 Q8N814 137 aa9.01□□□□□ -0.97
CLCN4-203ENST00000421085 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
CLCN4-203ENST00000421085 ADAMTSL4-AS1Q5T5F5 129 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms