RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
NPIPB3-201ENST00000419180 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
NPIPB3-201ENST00000419180 GTSF1Q8WW33 167 aa5.4□□□□□ -1.54
NPIPB3-201ENST00000419180 TRBV20OR9-2A0A075B6H5 130 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 IGKV3-7A0A075B6H7 116 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV3OR16-8A0A075B7F1 116 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 IGKV1-6A0A0C4DH72 117 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 A8MUN3 132 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 E7EUB6 86 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 M0R381 172 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 LST1O00453 97 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 LINC00242Q5T6M2 205 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
NPIPB3-201ENST00000419180 TRBV6-6A0A0A6YYG2 114 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 ATOX1O00244 68 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 NDUFA4O00483 81 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 FAUP35544 74 aaKnown RBP5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 RPL27AP46776 148 aaKnown RBP5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 DEFB131AP59861 70 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 SH2D6Q7Z4S9 175 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 TOMM5Q8N4H5 51 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 CSNK1G2-AS1Q8NCQ2 148 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 FAM213BQ8TBF2 198 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 FAM3DQ96BQ1 224 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 PGLYRP4Q96LB8 373 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 HDHD3Q9BSH5 251 aaPredicted RBP5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 GABARAPL3Q9BY60 117 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 GABARAPL1Q9H0R8 117 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 SDF2L1Q9HCN8 221 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 TMEM14BQ9NUH8 114 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 LINC00473A8K010 186 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 E9PLD3 99 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 TCL1BO95988 128 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 IGKCP01834 107 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 DEFA4P12838 97 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 RHPN1-AS1Q9BWJ2 59 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 PLA2G2DQ9UNK4 145 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 V9GY05 133 aa5.37□□□□□ -1.55
NPIPB3-201ENST00000419180 TRBV6-7A0A0A0MS04 114 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV3-49A0A0A0MS15 119 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 HBBP68871 147 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 TMEM136Q6ZRR5 245 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 Q6ZSN1 163 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 TMEM167AQ8TBQ9 72 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 ZNF414Q96IQ9 312 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 MGST2Q99735 147 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 CHCHD5Q9BSY4 110 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 LSM2Q9Y333 95 aaKnown RBP5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 DNAH8Q96JB1 4490 aa5.36□□□□□ -1.55
NPIPB3-201ENST00000419180 TRAV14DV4A0A0A6YYC5 116 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 COX7A2LO14548 114 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 HLA-DQA1P01909 254 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 SPART-AS1P0CW21 52 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 CEND1Q8N111 149 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 OR5C1Q8NGR4 320 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 LINC01600Q96MT4 127 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 F11RQ9Y624 299 aaKnown RBP5.35□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV3OR16-13A0A075B7E8 117 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV3-74A0A0B4J1X5 117 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 TRAV2A0A0B4J234 112 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 A0A0J9YXV3 536 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 HTN3P15516 51 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 CSN1S1P47710 185 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 ZNF80P51504 273 aaPredicted RBP5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 ORMDL2Q53FV1 153 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 KRTAP1-5Q9BYS1 174 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 SLC25A22Q9H936 323 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 MANBALQ9NQG1 85 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 HHLA3Q9XRX5 114 aa5.34□□□□□ -1.55
NPIPB3-201ENST00000419180 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 ZNF324O75467 553 aaPredicted RBP5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 PTHLHP12272 177 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 FUSP35637 526 aaKnown RBP eCLIP5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 LINC00313P59037 77 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 KRTDAPP60985 99 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 ERVK-16P61578 105 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 CFAP126Q5VTH2 177 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 CHCHD10Q8WYQ3 142 aaPredicted RBP5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 HIST1H4GQ99525 98 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms