RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
PTCD3-204ENST00000418628 PGPEP1Q9NXJ5 209 aa12.28□□□□□ -0.44
PTCD3-204ENST00000418628 MT-ND6P03923 174 aa12.27□□□□□ -0.45
PTCD3-204ENST00000418628 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
PTCD3-204ENST00000418628 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
PTCD3-204ENST00000418628 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
PTCD3-204ENST00000418628 RYR1P21817 5038 aa12.26□□□□□ -0.45
PTCD3-204ENST00000418628 Q8N8P6 123 aa12.26□□□□□ -0.45
PTCD3-204ENST00000418628 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
PTCD3-204ENST00000418628 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
PTCD3-204ENST00000418628 TGIF2-C20orf24A0A0A6YYL0 155 aa12.25□□□□□ -0.45
PTCD3-204ENST00000418628 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCD3-204ENST00000418628 IGLV10-54A0A075B6I4 117 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 LECT2O14960 151 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 RPL39P62891 51 aaKnown RBP12.24□□□□□ -0.45
PTCD3-204ENST00000418628 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 TMEM101Q96IK0 257 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 DNAH8Q96JB1 4490 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 HERC2O95714 4834 aa12.24□□□□□ -0.45
PTCD3-204ENST00000418628 ZNF664Q8N3J9 261 aa12.23□□□□□ -0.45
PTCD3-204ENST00000418628 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
PTCD3-204ENST00000418628 HSPG2P98160 4391 aa12.23□□□□□ -0.45
PTCD3-204ENST00000418628 K7EMI3 77 aa12.22□□□□□ -0.45
PTCD3-204ENST00000418628 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
PTCD3-204ENST00000418628 ALKBH7Q9BT30 221 aaPredicted RBP12.22□□□□□ -0.45
PTCD3-204ENST00000418628 MRPL18Q9H0U6 180 aaKnown RBP12.22□□□□□ -0.45
PTCD3-204ENST00000418628 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
PTCD3-204ENST00000418628 USP17L23D6RBM5 183 aa12.21□□□□□ -0.45
PTCD3-204ENST00000418628 Q6ZUT4 128 aa12.21□□□□□ -0.45
PTCD3-204ENST00000418628 NXT2Q9NPJ8 142 aaKnown RBP12.21□□□□□ -0.45
PTCD3-204ENST00000418628 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
PTCD3-204ENST00000418628 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
PTCD3-204ENST00000418628 LINC01546A6NGU7 62 aa12.2□□□□□ -0.46
PTCD3-204ENST00000418628 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
PTCD3-204ENST00000418628 IGLV5-52A0A0A0MRZ9 124 aa12.19□□□□□ -0.46
PTCD3-204ENST00000418628 CDK2AP2O75956 126 aa12.19□□□□□ -0.46
PTCD3-204ENST00000418628 RAB5AP20339 215 aa12.19□□□□□ -0.46
PTCD3-204ENST00000418628 IFI27P40305 119 aaPredicted RBP12.19□□□□□ -0.46
PTCD3-204ENST00000418628 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
PTCD3-204ENST00000418628 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
PTCD3-204ENST00000418628 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
PTCD3-204ENST00000418628 IGKV3OR2-268A0A0C4DH90 116 aa12.18□□□□□ -0.46
PTCD3-204ENST00000418628 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
PTCD3-204ENST00000418628 DGAT2L7PQ6IED9 249 aa12.18□□□□□ -0.46
PTCD3-204ENST00000418628 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
PTCD3-204ENST00000418628 FOXI1Q12951 378 aa12.17□□□□□ -0.46
PTCD3-204ENST00000418628 ORMDL2Q53FV1 153 aa12.17□□□□□ -0.46
PTCD3-204ENST00000418628 CBLN2Q8IUK8 224 aa12.17□□□□□ -0.46
PTCD3-204ENST00000418628 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
PTCD3-204ENST00000418628 PRSS1P07477 247 aa12.16□□□□□ -0.46
PTCD3-204ENST00000418628 GCSHP23434 173 aa12.16□□□□□ -0.46
PTCD3-204ENST00000418628 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
PTCD3-204ENST00000418628 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
PTCD3-204ENST00000418628 C15orf56Q8N910 161 aa12.16□□□□□ -0.46
PTCD3-204ENST00000418628 CCL25O15444 150 aa12.15□□□□□ -0.46
PTCD3-204ENST00000418628 C2orf66Q6UXQ4 117 aa12.15□□□□□ -0.46
PTCD3-204ENST00000418628 SMCO4Q9NRQ5 59 aa12.15□□□□□ -0.46
PTCD3-204ENST00000418628 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
PTCD3-204ENST00000418628 IGLV4-3A0A075B6K6 122 aa12.14□□□□□ -0.47
PTCD3-204ENST00000418628 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
PTCD3-204ENST00000418628 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
PTCD3-204ENST00000418628 NPSP0C0P6 89 aa12.13□□□□□ -0.47
PTCD3-204ENST00000418628 SS18Q15532 418 aa12.13□□□□□ -0.47
PTCD3-204ENST00000418628 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
PTCD3-204ENST00000418628 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
PTCD3-204ENST00000418628 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
PTCD3-204ENST00000418628 XCL1P47992 114 aa12.12□□□□□ -0.47
PTCD3-204ENST00000418628 Q6ZSA8 131 aa12.12□□□□□ -0.47
PTCD3-204ENST00000418628 C18orf32Q8TCD1 76 aa12.12□□□□□ -0.47
PTCD3-204ENST00000418628 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
PTCD3-204ENST00000418628 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
PTCD3-204ENST00000418628 URB1-AS1Q96HZ7 61 aa12.11□□□□□ -0.47
PTCD3-204ENST00000418628 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
PTCD3-204ENST00000418628 TOMM6Q96B49 74 aa12.1□□□□□ -0.47
PTCD3-204ENST00000418628 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
PTCD3-204ENST00000418628 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
PTCD3-204ENST00000418628 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
PTCD3-204ENST00000418628 AMELXQ99217 191 aa12.09□□□□□ -0.47
PTCD3-204ENST00000418628 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
PTCD3-204ENST00000418628 SLPIP03973 132 aa12.08□□□□□ -0.48
PTCD3-204ENST00000418628 G0S2P27469 103 aa12.08□□□□□ -0.48
PTCD3-204ENST00000418628 XGP55808 180 aa12.08□□□□□ -0.48
PTCD3-204ENST00000418628 KRTAP17-1Q9BYP8 105 aa12.08□□□□□ -0.48
PTCD3-204ENST00000418628 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
PTCD3-204ENST00000418628 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
PTCD3-204ENST00000418628 CFAP161Q6P656 301 aa12.07□□□□□ -0.48
PTCD3-204ENST00000418628 C9orf163Q8N9P6 203 aa12.07□□□□□ -0.48
PTCD3-204ENST00000418628 A0A096LNJ9 63 aa12.06□□□□□ -0.48
PTCD3-204ENST00000418628 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
PTCD3-204ENST00000418628 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
PTCD3-204ENST00000418628 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
PTCD3-204ENST00000418628 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
PTCD3-204ENST00000418628 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
PTCD3-204ENST00000418628 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
PTCD3-204ENST00000418628 TEX43Q6ZNM6 134 aa12.05□□□□□ -0.48
PTCD3-204ENST00000418628 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
PTCD3-204ENST00000418628 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
PTCD3-204ENST00000418628 COLCA2A8K830 154 aa12.04□□□□□ -0.48
PTCD3-204ENST00000418628 UBE2D1P51668 147 aa12.04□□□□□ -0.48
PTCD3-204ENST00000418628 ERASQ7Z444 233 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms