RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
UBXN4-203ENST00000416538 SRSF3P84103 164 aaKnown RBP9.59□□□□□ -0.87
UBXN4-203ENST00000416538 FOXI1Q12951 378 aa9.59□□□□□ -0.87
UBXN4-203ENST00000416538 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
UBXN4-203ENST00000416538 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
UBXN4-203ENST00000416538 PMCHP20382 165 aa9.58□□□□□ -0.88
UBXN4-203ENST00000416538 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
UBXN4-203ENST00000416538 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
UBXN4-203ENST00000416538 AP5S1Q9NUS5 200 aa9.58□□□□□ -0.88
UBXN4-203ENST00000416538 A0A087WYN8 130 aa9.57□□□□□ -0.88
UBXN4-203ENST00000416538 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
UBXN4-203ENST00000416538 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
UBXN4-203ENST00000416538 NRACQ8N912 160 aa9.57□□□□□ -0.88
UBXN4-203ENST00000416538 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
UBXN4-203ENST00000416538 ST20Q9HBF5 79 aa9.57□□□□□ -0.88
UBXN4-203ENST00000416538 TRBV27A0A0K0K1C4 114 aa9.56□□□□□ -0.88
UBXN4-203ENST00000416538 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
UBXN4-203ENST00000416538 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
UBXN4-203ENST00000416538 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
UBXN4-203ENST00000416538 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
UBXN4-203ENST00000416538 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
UBXN4-203ENST00000416538 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 CCL25O15444 150 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 XCL1P47992 114 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 COX6A2Q02221 97 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 PEA15Q15121 130 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
UBXN4-203ENST00000416538 OXTP01178 125 aa9.54□□□□□ -0.88
UBXN4-203ENST00000416538 ADIRFQ15847 76 aa9.54□□□□□ -0.88
UBXN4-203ENST00000416538 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
UBXN4-203ENST00000416538 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
UBXN4-203ENST00000416538 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
UBXN4-203ENST00000416538 C7orf77A4D0Y5 90 aa9.53□□□□□ -0.88
UBXN4-203ENST00000416538 RIGQ13278 110 aa9.53□□□□□ -0.88
UBXN4-203ENST00000416538 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
UBXN4-203ENST00000416538 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
UBXN4-203ENST00000416538 A0A096LNI7 61 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 SMIM27A0A1W2PRY6 76 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 MT1HL1P0DM35 61 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
UBXN4-203ENST00000416538 RNASE13Q5GAN3 156 aaKnown RBP9.52□□□□□ -0.89
UBXN4-203ENST00000416538 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 BTF3L4Q96K17 158 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
UBXN4-203ENST00000416538 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
UBXN4-203ENST00000416538 SUMO2P61956 95 aaKnown RBP9.51□□□□□ -0.89
UBXN4-203ENST00000416538 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
UBXN4-203ENST00000416538 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
UBXN4-203ENST00000416538 NAT8BQ9UHF3 227 aa9.51□□□□□ -0.89
UBXN4-203ENST00000416538 PHOX2AO14813 284 aa9.5□□□□□ -0.89
UBXN4-203ENST00000416538 Q6ZUT4 128 aa9.5□□□□□ -0.89
UBXN4-203ENST00000416538 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
UBXN4-203ENST00000416538 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
UBXN4-203ENST00000416538 CAMPP49913 170 aa9.49□□□□□ -0.89
UBXN4-203ENST00000416538 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
UBXN4-203ENST00000416538 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
UBXN4-203ENST00000416538 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
UBXN4-203ENST00000416538 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
UBXN4-203ENST00000416538 A0A1B0GXF2 115 aa9.47□□□□□ -0.89
UBXN4-203ENST00000416538 VCYO14598 125 aa9.47□□□□□ -0.89
UBXN4-203ENST00000416538 FCER1GP30273 86 aa9.47□□□□□ -0.89
UBXN4-203ENST00000416538 MRPL54Q6P161 138 aaKnown RBP9.47□□□□□ -0.89
UBXN4-203ENST00000416538 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
UBXN4-203ENST00000416538 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
UBXN4-203ENST00000416538 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.46□□□□□ -0.9
UBXN4-203ENST00000416538 PPP1R17O96001 155 aa9.46□□□□□ -0.9
UBXN4-203ENST00000416538 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
UBXN4-203ENST00000416538 SS18Q15532 418 aa9.46□□□□□ -0.9
UBXN4-203ENST00000416538 STPG4Q8N801 248 aa9.46□□□□□ -0.9
UBXN4-203ENST00000416538 DPH3Q96FX2 82 aa9.46□□□□□ -0.9
UBXN4-203ENST00000416538 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
UBXN4-203ENST00000416538 TRBV24-1A0A075B6N3 115 aa9.45□□□□□ -0.9
UBXN4-203ENST00000416538 NPYP01303 97 aa9.45□□□□□ -0.9
UBXN4-203ENST00000416538 PRR3P79522 188 aaKnown RBP9.45□□□□□ -0.9
UBXN4-203ENST00000416538 TNXBP22105 4242 aa9.45□□□□□ -0.9
UBXN4-203ENST00000416538 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 A0A1B0GW15 77 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 D6R8Y8 96 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 RAB14P61106 215 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
UBXN4-203ENST00000416538 Q6ZRU5 148 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
UBXN4-203ENST00000416538 IGLV4-69A0A075B6H9 119 aa9.43□□□□□ -0.9
UBXN4-203ENST00000416538 HBBP68871 147 aa9.43□□□□□ -0.9
UBXN4-203ENST00000416538 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
UBXN4-203ENST00000416538 OPRPNQ99935 248 aaPredicted RBP9.43□□□□□ -0.9
UBXN4-203ENST00000416538 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
UBXN4-203ENST00000416538 TIMM21Q9BVV7 248 aa9.43□□□□□ -0.9
UBXN4-203ENST00000416538 KRTAP9-6A0A140TA67 174 aa9.42□□□□□ -0.9
UBXN4-203ENST00000416538 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
UBXN4-203ENST00000416538 CKS2P33552 79 aa9.42□□□□□ -0.9
UBXN4-203ENST00000416538 SERTAD4-AS1Q5TG53 156 aa9.42□□□□□ -0.9
UBXN4-203ENST00000416538 C1orf196B1AJZ1 125 aa9.41□□□□□ -0.9
UBXN4-203ENST00000416538 COX7A2LO14548 114 aa9.41□□□□□ -0.9
UBXN4-203ENST00000416538 S100A8P05109 93 aa9.41□□□□□ -0.9
UBXN4-203ENST00000416538 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms