RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
YIPF3-203ENST00000416380 VCYO14598 125 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 PPP1R17O96001 155 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
YIPF3-203ENST00000416380 PACRGQ96M98 296 aaPredicted RBP8.45□□□□□ -1.06
YIPF3-203ENST00000416380 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 TMEM243Q9BU79 118 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 KLK12Q9UKR0 248 aa8.45□□□□□ -1.06
YIPF3-203ENST00000416380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
YIPF3-203ENST00000416380 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
YIPF3-203ENST00000416380 AMTP48728 403 aa8.44□□□□□ -1.06
YIPF3-203ENST00000416380 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
YIPF3-203ENST00000416380 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
YIPF3-203ENST00000416380 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
YIPF3-203ENST00000416380 IFITM10A6NMD0 228 aa8.43□□□□□ -1.06
YIPF3-203ENST00000416380 HSBP1O75506 76 aa8.43□□□□□ -1.06
YIPF3-203ENST00000416380 PMCHP20382 165 aa8.43□□□□□ -1.06
YIPF3-203ENST00000416380 WFDC2Q14508 124 aa8.43□□□□□ -1.06
YIPF3-203ENST00000416380 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
YIPF3-203ENST00000416380 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
YIPF3-203ENST00000416380 A0A087WX48 190 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 TMEM262E9PQX1 116 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 H7C423 109 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 LINC00518Q8N0U6 118 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 PRSS3P2Q8NHM4 247 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
YIPF3-203ENST00000416380 A0A087WTM6 91 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 NUPR1O60356 82 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 FGF6P10767 208 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 LINC00310P59036 64 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 LINC00269Q8N2A0 174 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 Q9HAA7 133 aa8.41□□□□□ -1.06
YIPF3-203ENST00000416380 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 LOC389332A0A1B0GUA5 103 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 LINC01546A6NGU7 62 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 TCAPO15273 167 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 LINC00614P0C842 121 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 PKIAP61925 76 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 UBE2WQ96B02 151 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 UBE2D4Q9Y2X8 147 aa8.4□□□□□ -1.06
YIPF3-203ENST00000416380 FAT1Q14517 4588 aa8.39□□□□□ -1.07
YIPF3-203ENST00000416380 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
YIPF3-203ENST00000416380 Q8N8P6 123 aa8.39□□□□□ -1.07
YIPF3-203ENST00000416380 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
YIPF3-203ENST00000416380 C12orf57Q99622 126 aa8.39□□□□□ -1.07
YIPF3-203ENST00000416380 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
YIPF3-203ENST00000416380 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
YIPF3-203ENST00000416380 REG3AQ06141 175 aa8.38□□□□□ -1.07
YIPF3-203ENST00000416380 AP5S1Q9NUS5 200 aa8.38□□□□□ -1.07
YIPF3-203ENST00000416380 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
YIPF3-203ENST00000416380 ZNF25P17030 456 aaPredicted RBP8.37□□□□□ -1.07
YIPF3-203ENST00000416380 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
YIPF3-203ENST00000416380 JOSD1Q15040 202 aaPredicted RBP8.37□□□□□ -1.07
YIPF3-203ENST00000416380 MIAQ16674 131 aa8.37□□□□□ -1.07
YIPF3-203ENST00000416380 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
YIPF3-203ENST00000416380 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
YIPF3-203ENST00000416380 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
YIPF3-203ENST00000416380 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
YIPF3-203ENST00000416380 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
YIPF3-203ENST00000416380 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
YIPF3-203ENST00000416380 UBE2L6O14933 153 aa8.35□□□□□ -1.07
YIPF3-203ENST00000416380 FCER1GP30273 86 aa8.35□□□□□ -1.07
YIPF3-203ENST00000416380 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
YIPF3-203ENST00000416380 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
YIPF3-203ENST00000416380 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
YIPF3-203ENST00000416380 IGKV2D-24A0A075B6R9 120 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 KRTDAPP60985 99 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 SPATA12Q7Z6I5 190 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 Q8N814 137 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 OR5A1Q8NGJ0 315 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
YIPF3-203ENST00000416380 BAALCQ8WXS3 180 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 HSPB8Q9UJY1 196 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 PYGO1Q9Y3Y4 419 aa8.34□□□□□ -1.07
YIPF3-203ENST00000416380 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 A0A096LNJ9 63 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 K7EMI3 77 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 LEPROTL1O95214 131 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 S100A12P80511 92 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 Q6ZUT4 128 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 COX11Q9Y6N1 276 aa8.33□□□□□ -1.08
YIPF3-203ENST00000416380 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 HBDP02042 147 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
YIPF3-203ENST00000416380 FOXI1Q12951 378 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 KRTAP17-1Q9BYP8 105 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
YIPF3-203ENST00000416380 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
YIPF3-203ENST00000416380 LECT2O14960 151 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms