RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 RASL10AQ92737 203 aa6.55□□□□□ -1.36
CHRNA1-206ENST00000416004 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 TMEM262E9PQX1 116 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 Q6ZSN1 163 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 RPL39LQ96EH5 51 aaKnown RBP6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
CHRNA1-206ENST00000416004 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 A8MWV9 139 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 F5H697 171 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 RS1O15537 224 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 SPART-AS1P0CW21 52 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 C18orf15Q96N68 181 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 GAGE7O76087 117 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 IFI27P40305 119 aaPredicted RBP6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 ZNF56Q15929 161 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 PPDPFLQ8WWR9 84 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 C20orf78Q9BR46 151 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 Q9UF83 564 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
CHRNA1-206ENST00000416004 TENM2Q9NT68 2774 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 K7ERJ3 54 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 M0QY20 66 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 MT-ATP8P03928 68 aa6.52□□□□□ -1.37
CHRNA1-206ENST00000416004 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 ATP5LO75964 103 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 P0DMU3 169 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 XGP55808 180 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 MAP1LC3AQ9H492 121 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 DEFB131BA0A096LNP1 70 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 HERV-K104P63124 156 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 Q6Q795 121 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 HHLA3Q9XRX5 114 aa6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
CHRNA1-206ENST00000416004 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 M0QXV9 152 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 IGKCP01834 107 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 DEFB130BP0DP73 79 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 DEFB130AP0DP74 79 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 RPL32P62910 135 aaKnown RBP6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 Q6ZTC4 211 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 LINC00612Q8N6U2 182 aa6.5□□□□□ -1.37
CHRNA1-206ENST00000416004 TRAV4A0A0B4J268 109 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 RHODO00212 210 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 DPM2O94777 84 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 SUMO2P61956 95 aaKnown RBP6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 GAGE4Q13068 117 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 ODF1Q14990 250 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 ZFP2Q6ZN57 461 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 DEFB104AQ8WTQ1 72 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 CELA1Q9UNI1 258 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 DAD1P61803 113 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 Q8N8P6 123 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
CHRNA1-206ENST00000416004 TRBV6-5A0A0K0K1A5 114 aa6.48□□□□□ -1.37
CHRNA1-206ENST00000416004 B5MCH6 92 aa6.48□□□□□ -1.37
CHRNA1-206ENST00000416004 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 FCER1GP30273 86 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 PPP1R17O96001 155 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 HTN3P15516 51 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 FHL2Q14192 279 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 NFE4Q86UQ8 179 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 NEXN-AS1Q8NBZ9 246 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
CHRNA1-206ENST00000416004 STARD9Q9P2P6 4700 aa6.46□□□□□ -1.37
CHRNA1-206ENST00000416004 PRSS29PA6NIE9 313 aa6.46□□□□□ -1.38
CHRNA1-206ENST00000416004 H7C1H1 209 aa6.46□□□□□ -1.38
CHRNA1-206ENST00000416004 SMCPP49901 116 aaPredicted RBP6.46□□□□□ -1.38
CHRNA1-206ENST00000416004 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
CHRNA1-206ENST00000416004 UBE2DNLQ8IWF7 75 aa6.46□□□□□ -1.38
CHRNA1-206ENST00000416004 LOC100131303A0A0U1RQF7 123 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 K7EQD1 137 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 PLNP26678 52 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 UBE2D3P61077 147 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms