RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 CMTM2Q8TAZ6 248 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF414Q96IQ9 312 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 RPP21Q9H633 154 aaKnown RBP3.98□□□□□ -1.77
EPHA4-204ENST00000415749 MRPL27Q9P0M9 148 aaKnown RBP3.98□□□□□ -1.77
EPHA4-204ENST00000415749 KLK9Q9UKQ9 250 aa3.98□□□□□ -1.77
EPHA4-204ENST00000415749 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 IGLV2-18A0A075B6J9 118 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 K7EIM0 57 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 LGALS9O00182 355 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 HYPMO75409 117 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 LTAP01374 205 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 IGKV1-17P01599 117 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 TCRAP04437 139 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 NBEAP1P0C6P0 100 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 GNG5P63218 68 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 ATP5G2Q06055 141 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 C1orf134Q5TEV5 83 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 Q6ZR54 194 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 BAGE2Q86Y30 109 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 C5orf17Q8NAS9 161 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 NUP35Q8NFH5 326 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 C18orf32Q8TCD1 76 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 TSKUQ8WUA8 353 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 C11orf68Q9H3H3 251 aaKnown RBP3.97□□□□□ -1.77
EPHA4-204ENST00000415749 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF586Q9NXT0 402 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 NAT8BQ9UHF3 227 aa3.97□□□□□ -1.77
EPHA4-204ENST00000415749 ZNF706Q9Y5V0 76 aaPredicted RBP3.97□□□□□ -1.77
EPHA4-204ENST00000415749 A0A1B0GV90 55 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 H3BRN7 92 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 APCSP02743 223 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF688P0C7X2 276 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 IGLC2P0DOY2 106 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 MGST1P10620 155 aaKnown RBP3.96□□□□□ -1.78
EPHA4-204ENST00000415749 SRIP30626 198 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 FOXA3P55318 350 aaPredicted RBP3.96□□□□□ -1.78
EPHA4-204ENST00000415749 RHOGP84095 191 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 RPL19P84098 196 aaKnown RBP3.96□□□□□ -1.78
EPHA4-204ENST00000415749 TDRG1Q3Y452 100 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 ATP5L2Q7Z4Y8 100 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 GPHB5Q86YW7 130 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 C15orf56Q8N910 161 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 GPR82Q96P67 336 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 OTORQ9NRC9 128 aa3.96□□□□□ -1.78
EPHA4-204ENST00000415749 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
EPHA4-204ENST00000415749 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 TRAV10A0A0B4J240 114 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 KLLNB2CW77 178 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF324O75467 553 aaPredicted RBP3.95□□□□□ -1.78
EPHA4-204ENST00000415749 SLC25A5P05141 298 aaKnown RBP3.95□□□□□ -1.78
EPHA4-204ENST00000415749 LINC00614P0C842 121 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 APELAP0DMC3 54 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 SCGB1C2P0DMR2 95 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 ORM2P19652 201 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 HLA-DMBP28068 263 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
EPHA4-204ENST00000415749 MRPL54Q6P161 138 aaKnown RBP3.95□□□□□ -1.78
EPHA4-204ENST00000415749 Q86TA4 180 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 SNHG12Q9BXW3 62 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 HIGD1AQ9Y241 93 aa3.95□□□□□ -1.78
EPHA4-204ENST00000415749 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
EPHA4-204ENST00000415749 IGHV3-21A0A0B4J1V1 117 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 FAM223BA6NKX1 122 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 HIGD1CA8MV81 97 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 SPINK4O60575 86 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 FAM223AQ8IWN6 122 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 LYPD1Q8N2G4 141 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 TTC9CQ8N5M4 171 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 SLC25A29Q8N8R3 303 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 TMEM75Q8N9X5 138 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 OR4B1Q8NGF8 309 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 MIEN1Q9BRT3 115 aa3.94□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF331Q9NQX6 463 aaPredicted RBP3.94□□□□□ -1.78
EPHA4-204ENST00000415749 TRAV30A0A087WSZ9 112 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 DEFB131BA0A096LNP1 70 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF705FA8MVS1 300 aaPredicted RBP3.93□□□□□ -1.78
EPHA4-204ENST00000415749 A8MWL6 223 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 BPY2O14599 106 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF705DP0CH99 300 aaPredicted RBP3.93□□□□□ -1.78
EPHA4-204ENST00000415749 ZNF705BP0CI00 300 aaPredicted RBP3.93□□□□□ -1.78
EPHA4-204ENST00000415749 CRIP1P50238 77 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 UBE2G1P62253 170 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 FAM222AQ5U5X8 452 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 TOMM20LQ6UXN7 152 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 FA2HQ7L5A8 372 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 TCF24Q7RTU0 167 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 FAM19A3Q7Z5A8 133 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 SPATA12Q7Z6I5 190 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 S100A7AQ86SG5 101 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 UBE2DNLQ8IWF7 75 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 EXOC3-AS1Q8N2X6 119 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 LINC00612Q8N6U2 182 aa3.93□□□□□ -1.78
EPHA4-204ENST00000415749 NDFIP1Q9BT67 221 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms