RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 PMVKQ15126 192 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 VAMP3Q15836 100 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 MTURNQ8N3F0 131 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 Q8NAQ8 132 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 BAALCQ8WXS3 180 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 SPANXA1Q9NS26 97 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 DKK2Q9UBU2 259 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 HHLA3Q9XRX5 114 aa4.7□□□□□ -1.66
HDAC8-211ENST00000415409 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 PRSS29PA6NIE9 313 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 F8VRH5 84 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 DEFB4AO15263 64 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 NPSP0C0P6 89 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 IGLC3P0DOY3 106 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 TMEM97Q5BJF2 176 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 CHCHD7Q9BUK0 85 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 CST9LQ9H4G1 147 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 MRPL35Q9NZE8 188 aaKnown RBP4.69□□□□□ -1.66
HDAC8-211ENST00000415409 Q9UF83 564 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 PRO0255Q9UI72 69 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 PYGO1Q9Y3Y4 419 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 SORL1Q92673 2214 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 MGAM2Q2M2H8 2515 aa4.69□□□□□ -1.66
HDAC8-211ENST00000415409 AGRNO00468 2067 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 ATP5G1P05496 136 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 HNRNPA3P51991 378 aaKnown RBP4.68□□□□□ -1.66
HDAC8-211ENST00000415409 CRYBA4P53673 196 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 SLC25A34Q6PIV7 304 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 STPG4Q8N801 248 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 GTSF1LQ9H1H1 148 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 TRRAPQ9Y4A5 3859 aa4.68□□□□□ -1.66
HDAC8-211ENST00000415409 IGLV4-3A0A075B6K6 122 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
HDAC8-211ENST00000415409 LOC100131303A0A0U1RQF7 123 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
HDAC8-211ENST00000415409 UBE2L6O14933 153 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 GYPEP15421 78 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 ZNF25P17030 456 aaPredicted RBP4.67□□□□□ -1.66
HDAC8-211ENST00000415409 ZC2HC1BQ5TFG8 222 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 TMEM243Q9BU79 118 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 TIMM21Q9BVV7 248 aa4.67□□□□□ -1.66
HDAC8-211ENST00000415409 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 MUC4Q99102 2169 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 TRBV25-1A0A075B6N4 114 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 F5H768 121 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 H7C423 109 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 COX8AP10176 69 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 NMUP48645 174 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 HERVK_113P61574 105 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 HERV-K104P63124 156 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 MRPS36P82909 103 aaKnown RBP4.66□□□□□ -1.66
HDAC8-211ENST00000415409 KPRPQ5T749 579 aaPredicted RBP4.66□□□□□ -1.66
HDAC8-211ENST00000415409 AMMECR1LQ6DCA0 310 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 ATP6V0E2Q8NHE4 81 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 TMEM101Q96IK0 257 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
HDAC8-211ENST00000415409 C11orf68Q9H3H3 251 aaKnown RBP4.66□□□□□ -1.66
HDAC8-211ENST00000415409 RETNQ9HD89 108 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 UBE2D4Q9Y2X8 147 aa4.66□□□□□ -1.66
HDAC8-211ENST00000415409 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 LINC00694P0DN24 101 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 FGF6P10767 208 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 HTN3P15516 51 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 DEFB121Q5J5C9 76 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 CEMP1Q6PRD7 247 aaPredicted RBP4.65□□□□□ -1.67
HDAC8-211ENST00000415409 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 SH2D6Q7Z4S9 175 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 BOD1L2Q8IYS8 172 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 AMELXQ99217 191 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 CHCHD5Q9BSY4 110 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 MRPS16Q9Y3D3 137 aaKnown RBP4.65□□□□□ -1.67
HDAC8-211ENST00000415409 CSDC2Q9Y534 153 aaKnown RBP4.65□□□□□ -1.67
HDAC8-211ENST00000415409 CMYA5Q8N3K9 4069 aa4.65□□□□□ -1.67
HDAC8-211ENST00000415409 NOTCH3Q9UM47 2321 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 IGLV4-69A0A075B6H9 119 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 A0A0J9YY99 117 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 C11orf86A6NJI1 115 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 K7EIL1 84 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 M0R143 59 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 TCTAP57738 103 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 MRPL23Q16540 153 aaKnown RBP4.64□□□□□ -1.67
HDAC8-211ENST00000415409 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 NFE4Q86UQ8 179 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 SBSPONQ8IVN8 264 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 CHAC1Q9BUX1 264 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 DNAH3Q8TD57 4116 aa4.64□□□□□ -1.67
HDAC8-211ENST00000415409 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
HDAC8-211ENST00000415409 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
HDAC8-211ENST00000415409 E9PLD3 99 aa4.63□□□□□ -1.67
HDAC8-211ENST00000415409 SIVA1O15304 175 aa4.63□□□□□ -1.67
HDAC8-211ENST00000415409 PRB2P02812 416 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-211ENST00000415409 SEC11AP67812 179 aa4.63□□□□□ -1.67
HDAC8-211ENST00000415409 GAGE6Q13070 117 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms