RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ARL14EPLP0DKL9 152 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 INSL3P51460 131 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 TAS2R45P59539 299 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 SPATA12Q7Z6I5 190 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 DYNAPQ8N1N2 210 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 PLEKHB2Q96CS7 222 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 SCRT1Q9BWW7 348 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 TP53TG3Q9ULZ0 132 aa1.59□□□□□ -2.15
MCF2-204ENST00000414978 TCRBV4S1A1TA0A5B7 111 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 H3BQ15 152 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 H3BT86 120 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 TSPEAR-AS2P59090 65 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 EBI3Q14213 229 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 LCE1FQ5T754 118 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 C10orf113Q5VZT2 155 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 BRD3OSQ6XYD6 125 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 Q8N6K4 173 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 PFDN5Q99471 154 aa1.59□□□□□ -2.16
MCF2-204ENST00000414978 FAM103A1Q9BTL3 118 aaKnown RBP1.59□□□□□ -2.16
MCF2-204ENST00000414978 MRPL32Q9BYC8 188 aaKnown RBP1.59□□□□□ -2.16
MCF2-204ENST00000414978 IGKV1OR2-108A0A075B7D4 117 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 C19orf71A6NCJ1 209 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF727A8MUV8 499 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 A8MWP6 167 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 F6UZH7 168 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF324O75467 553 aaPredicted RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 GCHFRP30047 84 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF90Q03938 601 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 FAM104BQ5XKR9 115 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF705AQ6ZN79 300 aaPredicted RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 MIR17HGQ75NE6 70 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 GPHB5Q86YW7 130 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 PRR15Q8IV56 129 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TVP23CQ96ET8 276 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TRGV9Q99603 122 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 SMIM7Q9BQ49 75 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 KRTAP4-5Q9BYR2 181 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 SMCO4Q9NRQ5 59 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TMEM167BQ9NRX6 74 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 FUT9Q9Y231 359 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TENM3Q9P273 2699 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 C7orf77A4D0Y5 90 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 I3L2K1 104 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 GNG7O60262 68 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 HYPMO75409 117 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 APOMO95445 188 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 HIST1H1BP16401 226 aaKnown RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF22P17026 224 aaPredicted RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 ZNF80P51504 273 aaPredicted RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 UBE2L3P68036 154 aaKnown RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 Q56UQ5 140 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 SAMD13Q5VXD3 122 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 UNQ5815/PRO19632Q6UWF5 114 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 Q6ZR54 194 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TTC9CQ8N5M4 171 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 FAM24BQ8N5W8 94 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TXNDC17Q9BRA2 123 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 RPP21Q9H633 154 aaKnown RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 MRPL36Q9P0J6 103 aaKnown RBP1.58□□□□□ -2.16
MCF2-204ENST00000414978 CSMD3Q7Z407 3707 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 IGKV2D-24A0A075B6R9 120 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 IGKV1D-37A0A075B6S9 117 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 TRAV30A0A087WSZ9 112 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 NUPR2A6NF83 97 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 A8MUU9 505 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 H3BQ85 93 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 H3BUX3 64 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 K7EIM0 57 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 OR10J4P0C629 311 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ATP5G3P48201 142 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 ADIRFQ15847 76 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 LINC00305Q7Z4B0 112 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 C5orf56Q8N8D9 126 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 BORCS7Q96B45 105 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 HSPB9Q9BQS6 159 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 MIEN1Q9BRT3 115 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 HIGD1AQ9Y241 93 aa1.58□□□□□ -2.16
MCF2-204ENST00000414978 NOTCH1P46531 2555 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 IGLC1P0CG04 106 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 LY6EQ16553 131 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 GOLT1AQ6ZVE7 132 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 UPK3BQ9BT76 320 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 S4R3C0 116 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 ARL2-SNX15V9GYD0 113 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 A0A087WWC5 75 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 TRAV41A0A0B4J266 112 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 MT-ND4LP03901 98 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 HINT1P49773 126 aaPredicted RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 RHOGP84095 191 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 MRPL51Q4U2R6 128 aaKnown RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 IBA57Q5T440 356 aaKnown RBP1.57□□□□□ -2.16
MCF2-204ENST00000414978 IMMP2LQ96T52 175 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 BIN3Q9NQY0 253 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 ERG28Q9UKR5 140 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 WNK1Q9H4A3 2382 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 OR2T8A6NH00 312 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 G3V318 75 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 IGKV1-17P01599 117 aa1.57□□□□□ -2.16
MCF2-204ENST00000414978 PYYP10082 97 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms