RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ZNF80P51504 273 aaPredicted RBP13.83□□□□□ -0.19
SHANK3-202ENST00000414786 NEXN-AS1Q8NBZ9 246 aa13.83□□□□□ -0.19
SHANK3-202ENST00000414786 SPATA12Q7Z6I5 190 aa13.83□□□□□ -0.2
SHANK3-202ENST00000414786 SPANXCQ9NY87 97 aa13.83□□□□□ -0.2
SHANK3-202ENST00000414786 IGLC6P0CF74 106 aa13.83□□□□□ -0.2
SHANK3-202ENST00000414786 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.2
SHANK3-202ENST00000414786 PRRC2AP48634 2157 aaKnown RBP13.83□□□□□ -0.2
SHANK3-202ENST00000414786 IGHV6-1A0A0B4J1U7 121 aa13.83□□□□□ -0.2
SHANK3-202ENST00000414786 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
SHANK3-202ENST00000414786 LINC00322Q6ZN03 302 aaPredicted RBP13.82□□□□□ -0.2
SHANK3-202ENST00000414786 Q6ZSV7 163 aa13.82□□□□□ -0.2
SHANK3-202ENST00000414786 HCFC1P51610 2035 aa13.82□□□□□ -0.2
SHANK3-202ENST00000414786 ZNF706Q9Y5V0 76 aaPredicted RBP13.81□□□□□ -0.2
SHANK3-202ENST00000414786 DEFB116Q30KQ4 102 aa13.81□□□□□ -0.2
SHANK3-202ENST00000414786 FSHBP01225 129 aa13.8□□□□□ -0.2
SHANK3-202ENST00000414786 LINC01545Q5VT33 79 aa13.8□□□□□ -0.2
SHANK3-202ENST00000414786 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
SHANK3-202ENST00000414786 TMEM223A0PJW6 202 aa13.8□□□□□ -0.2
SHANK3-202ENST00000414786 TRBV6-8A0A0A6YYG3 113 aa13.8□□□□□ -0.2
SHANK3-202ENST00000414786 GPR179Q6PRD1 2367 aa13.79□□□□□ -0.2
SHANK3-202ENST00000414786 LINC01556Q5JQF7 62 aa13.79□□□□□ -0.2
SHANK3-202ENST00000414786 PRORYQ9H606 182 aa13.78□□□□□ -0.2
SHANK3-202ENST00000414786 TRBV27A0A0K0K1C4 114 aa13.78□□□□□ -0.2
SHANK3-202ENST00000414786 HIVEP2P31629 2446 aa13.77□□□□□ -0.2
SHANK3-202ENST00000414786 FAM240AA0A1B0GVK7 77 aa13.77□□□□□ -0.2
SHANK3-202ENST00000414786 TRBV6-5A0A0K0K1A5 114 aa13.77□□□□□ -0.21
SHANK3-202ENST00000414786 MIFP14174 115 aa13.77□□□□□ -0.21
SHANK3-202ENST00000414786 PCOTHQ58A44 107 aa13.77□□□□□ -0.21
SHANK3-202ENST00000414786 SERTAD4-AS1Q5TG53 156 aa13.77□□□□□ -0.21
SHANK3-202ENST00000414786 CSPG4Q6UVK1 2322 aa13.77□□□□□ -0.21
SHANK3-202ENST00000414786 CFAP126Q5VTH2 177 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 Q8NA96 180 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 FAM167A-AS1Q96KT0 104 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 DSCAMO60469 2012 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 PTPN13Q12923 2485 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
SHANK3-202ENST00000414786 LOC107984640A0A0U1RRK4 108 aa13.75□□□□□ -0.21
SHANK3-202ENST00000414786 C1orf137Q5JT78 98 aa13.75□□□□□ -0.21
SHANK3-202ENST00000414786 C10orf25Q5T742 122 aa13.75□□□□□ -0.21
SHANK3-202ENST00000414786 SONP18583 2426 aaKnown RBP13.75□□□□□ -0.21
SHANK3-202ENST00000414786 Q6ZQY7 126 aa13.75□□□□□ -0.21
SHANK3-202ENST00000414786 A0A1W2PNU3 283 aaPredicted RBP13.75□□□□□ -0.21
SHANK3-202ENST00000414786 NDUFC2-KCTD14E9PQ53 114 aa13.75□□□□□ -0.21
SHANK3-202ENST00000414786 M0QXV9 152 aa13.74□□□□□ -0.21
SHANK3-202ENST00000414786 PDE6GP18545 87 aa13.74□□□□□ -0.21
SHANK3-202ENST00000414786 PLXNA2O75051 1894 aa13.74□□□□□ -0.21
SHANK3-202ENST00000414786 THSD7BQ9C0I4 1608 aa13.74□□□□□ -0.21
SHANK3-202ENST00000414786 TNFRSF13BO14836 293 aaPredicted RBP13.72□□□□□ -0.21
SHANK3-202ENST00000414786 MSMPQ1L6U9 139 aa13.72□□□□□ -0.21
SHANK3-202ENST00000414786 SMIM9A6NGZ8 99 aa13.72□□□□□ -0.21
SHANK3-202ENST00000414786 MT-ATP8P03928 68 aa13.71□□□□□ -0.21
SHANK3-202ENST00000414786 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.22
SHANK3-202ENST00000414786 SPANXB1Q9NS25 103 aaPredicted RBP13.7□□□□□ -0.22
SHANK3-202ENST00000414786 IGLV4-69A0A075B6H9 119 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 C9orf116Q5BN46 136 aaPredicted RBP13.7□□□□□ -0.22
SHANK3-202ENST00000414786 TIMM17BO60830 172 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 LMO4P61968 165 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 CTRLP40313 264 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 RBX1P62877 108 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 IGFL2Q6UWQ7 119 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 SBSPONQ8IVN8 264 aa13.7□□□□□ -0.22
SHANK3-202ENST00000414786 C6orf223Q8N319 242 aa13.69□□□□□ -0.22
SHANK3-202ENST00000414786 ZFHX2Q9C0A1 2572 aaPredicted RBP13.69□□□□□ -0.22
SHANK3-202ENST00000414786 H3BT86 120 aa13.69□□□□□ -0.22
SHANK3-202ENST00000414786 XGP55808 180 aa13.69□□□□□ -0.22
SHANK3-202ENST00000414786 LINC00337Q8N6G1 96 aa13.69□□□□□ -0.22
SHANK3-202ENST00000414786 LINC00643Q86TS7 51 aa13.69□□□□□ -0.22
SHANK3-202ENST00000414786 TRBV7-6A0A0J9YX20 115 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 IGLV1-47P01700 117 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 Q6ZS46 218 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 EXPH5Q8NEV8 1989 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 LINC00308Q8TCZ7 52 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 IGLV4-3A0A075B6K6 122 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 SIP14410 1827 aa13.68□□□□□ -0.22
SHANK3-202ENST00000414786 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
SHANK3-202ENST00000414786 EML5Q05BV3 1969 aa13.66□□□□□ -0.22
SHANK3-202ENST00000414786 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
SHANK3-202ENST00000414786 TRIAP1O43715 76 aa13.66□□□□□ -0.22
SHANK3-202ENST00000414786 CRIP2P52943 208 aaPredicted RBP13.66□□□□□ -0.22
SHANK3-202ENST00000414786 LINC01006Q8NI28 216 aa13.66□□□□□ -0.22
SHANK3-202ENST00000414786 SOSTDC1Q6X4U4 206 aa13.65□□□□□ -0.22
SHANK3-202ENST00000414786 M0R378 163 aa13.65□□□□□ -0.22
SHANK3-202ENST00000414786 PRLHP81277 87 aa13.65□□□□□ -0.22
SHANK3-202ENST00000414786 COA6Q5JTJ3 125 aaKnown RBP13.65□□□□□ -0.22
SHANK3-202ENST00000414786 Q6ZSR3 168 aa13.65□□□□□ -0.22
SHANK3-202ENST00000414786 IGLV3-1P01715 115 aa13.65□□□□□ -0.22
SHANK3-202ENST00000414786 K7EQG2 157 aa13.65□□□□□ -0.23
SHANK3-202ENST00000414786 TECTAO75443 2155 aa13.64□□□□□ -0.23
SHANK3-202ENST00000414786 PRR3P79522 188 aaKnown RBP13.64□□□□□ -0.23
SHANK3-202ENST00000414786 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
SHANK3-202ENST00000414786 NDUFA7O95182 113 aa13.63□□□□□ -0.23
SHANK3-202ENST00000414786 DHRS4-AS1Q9P1J3 65 aa13.62□□□□□ -0.23
SHANK3-202ENST00000414786 HIGD1BQ9P298 99 aa13.62□□□□□ -0.23
SHANK3-202ENST00000414786 LINC00208Q96KT6 92 aa13.62□□□□□ -0.23
SHANK3-202ENST00000414786 SMIM11BQ8TCY0 68 aa13.62□□□□□ -0.23
SHANK3-202ENST00000414786 RPL28P46779 137 aaKnown RBP13.62□□□□□ -0.23
SHANK3-202ENST00000414786 ZNF22P17026 224 aaPredicted RBP13.61□□□□□ -0.23
SHANK3-202ENST00000414786 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
SHANK3-202ENST00000414786 EDN2P20800 178 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms