RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TMEM101Q96IK0 257 aa10.56□□□□□ -0.72
SEMA3F-202ENST00000413852 TRAV13-1A0A0B4J241 112 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 TRGV11A0A075B6L2 103 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 KHDC1LQ5JSQ8 128 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 LINC01587Q99440 93 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 Q9H8V8 135 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 IGSF10Q6WRI0 2623 aa10.55□□□□□ -0.72
SEMA3F-202ENST00000413852 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
SEMA3F-202ENST00000413852 SOSTDC1Q6X4U4 206 aa10.54□□□□□ -0.72
SEMA3F-202ENST00000413852 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
SEMA3F-202ENST00000413852 C11orf44Q8N8P7 122 aa10.54□□□□□ -0.72
SEMA3F-202ENST00000413852 XCL2Q9UBD3 114 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE7O76087 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 GAGE4Q13068 117 aa10.53□□□□□ -0.72
SEMA3F-202ENST00000413852 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.72
SEMA3F-202ENST00000413852 LST1O00453 97 aa10.52□□□□□ -0.72
SEMA3F-202ENST00000413852 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.72
SEMA3F-202ENST00000413852 SPANXCQ9NY87 97 aa10.52□□□□□ -0.72
SEMA3F-202ENST00000413852 PYGO1Q9Y3Y4 419 aa10.52□□□□□ -0.72
SEMA3F-202ENST00000413852 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
SEMA3F-202ENST00000413852 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.73
SEMA3F-202ENST00000413852 SETXQ7Z333 2677 aaKnown RBP10.52□□□□□ -0.73
SEMA3F-202ENST00000413852 COX6CP09669 75 aa10.52□□□□□ -0.73
SEMA3F-202ENST00000413852 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
SEMA3F-202ENST00000413852 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
SEMA3F-202ENST00000413852 SMIM20Q8N5G0 67 aa10.51□□□□□ -0.73
SEMA3F-202ENST00000413852 RS1O15537 224 aa10.5□□□□□ -0.73
SEMA3F-202ENST00000413852 UCNP55089 124 aa10.5□□□□□ -0.73
SEMA3F-202ENST00000413852 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
SEMA3F-202ENST00000413852 SMCR5Q8TEV8 140 aa10.5□□□□□ -0.73
SEMA3F-202ENST00000413852 CCDC168Q8NDH2 2452 aa10.49□□□□□ -0.73
SEMA3F-202ENST00000413852 Q9HAA7 133 aa10.49□□□□□ -0.73
SEMA3F-202ENST00000413852 NBEAL2Q6ZNJ1 2754 aa10.49□□□□□ -0.73
SEMA3F-202ENST00000413852 M0QXV9 152 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 FAM218AQ96MZ4 157 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 PLA2G2AP14555 144 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 B4DSR2 109 aa10.48□□□□□ -0.73
SEMA3F-202ENST00000413852 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
SEMA3F-202ENST00000413852 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
SEMA3F-202ENST00000413852 PIEZO1Q92508 2521 aa10.47□□□□□ -0.73
SEMA3F-202ENST00000413852 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
SEMA3F-202ENST00000413852 FN1P02751 2386 aaKnown RBP10.46□□□□□ -0.73
SEMA3F-202ENST00000413852 ZNF702PQ9H963 129 aa10.46□□□□□ -0.73
SEMA3F-202ENST00000413852 SPANXA1Q9NS26 97 aa10.46□□□□□ -0.73
SEMA3F-202ENST00000413852 ZNF415Q09FC8 603 aa10.46□□□□□ -0.74
SEMA3F-202ENST00000413852 A0A1W2PRX2 142 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 H3BT86 120 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 PRIMA1Q86XR5 153 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 NDUFA1O15239 70 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 TMEM89A2RUT3 159 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 Q96MF0 132 aa10.45□□□□□ -0.74
SEMA3F-202ENST00000413852 LOC100131303A0A0U1RQF7 123 aa10.44□□□□□ -0.74
SEMA3F-202ENST00000413852 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
SEMA3F-202ENST00000413852 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
SEMA3F-202ENST00000413852 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
SEMA3F-202ENST00000413852 Q6ZTI0 123 aa10.44□□□□□ -0.74
SEMA3F-202ENST00000413852 SMIM1B2RUZ4 78 aa10.43□□□□□ -0.74
SEMA3F-202ENST00000413852 HERV-K104P63124 156 aa10.43□□□□□ -0.74
SEMA3F-202ENST00000413852 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
SEMA3F-202ENST00000413852 YAE1D1Q9NRH1 226 aa10.43□□□□□ -0.74
SEMA3F-202ENST00000413852 TOMM7Q9P0U1 55 aa10.43□□□□□ -0.74
SEMA3F-202ENST00000413852 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
SEMA3F-202ENST00000413852 C22orf24Q9Y442 160 aa10.42□□□□□ -0.74
SEMA3F-202ENST00000413852 ZNF462Q96JM2 2506 aa10.41□□□□□ -0.74
SEMA3F-202ENST00000413852 CIRBPQ14011 172 aaKnown RBP10.41□□□□□ -0.74
SEMA3F-202ENST00000413852 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
SEMA3F-202ENST00000413852 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
SEMA3F-202ENST00000413852 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
SEMA3F-202ENST00000413852 WFDC10AQ9H1F0 79 aa10.4□□□□□ -0.74
SEMA3F-202ENST00000413852 VPREB3Q9UKI3 123 aa10.4□□□□□ -0.74
SEMA3F-202ENST00000413852 COX7A2LO14548 114 aa10.4□□□□□ -0.74
SEMA3F-202ENST00000413852 Q6Q795 121 aa10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 ATP5G1P05496 136 aa10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
SEMA3F-202ENST00000413852 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
SEMA3F-202ENST00000413852 TIRAPP58753 221 aa10.38□□□□□ -0.75
SEMA3F-202ENST00000413852 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
SEMA3F-202ENST00000413852 GCN1Q92616 2671 aaKnown RBP10.38□□□□□ -0.75
SEMA3F-202ENST00000413852 LINC01356Q8N9X3 169 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 EDA2RQ9HAV5 297 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 MTORP42345 2549 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 INSP01308 110 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
SEMA3F-202ENST00000413852 F5H768 121 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 TIMM17BO60830 172 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms