RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 LINC00959A0A1B0GUT2 108 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 A0A1B0GW15 77 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 A0A1B0GXF2 115 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 PPP1R17O96001 155 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 FOXI1Q12951 378 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 CDC42SE2Q9NRR3 84 aa16.88■□□□□ 0.29
VEGFA-207ENST00000413642 CKS2P33552 79 aa16.87■□□□□ 0.29
VEGFA-207ENST00000413642 XCL1P47992 114 aa16.87■□□□□ 0.29
VEGFA-207ENST00000413642 RAB14P61106 215 aa16.87■□□□□ 0.29
VEGFA-207ENST00000413642 HBBP68871 147 aa16.87■□□□□ 0.29
VEGFA-207ENST00000413642 CCL25O15444 150 aa16.86■□□□□ 0.29
VEGFA-207ENST00000413642 FLG2Q5D862 2391 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-207ENST00000413642 LINC00862A6NCI5 91 aa16.85■□□□□ 0.29
VEGFA-207ENST00000413642 KRTAP10-4P60372 401 aaPredicted RBP16.85■□□□□ 0.29
VEGFA-207ENST00000413642 CFAP161Q6P656 301 aa16.85■□□□□ 0.29
VEGFA-207ENST00000413642 ZNF664Q8N3J9 261 aa16.85■□□□□ 0.29
VEGFA-207ENST00000413642 D6R8Y8 96 aa16.84■□□□□ 0.29
VEGFA-207ENST00000413642 PPP1R2P9O14990 202 aa16.84■□□□□ 0.29
VEGFA-207ENST00000413642 TNFRSF6BO95407 300 aa16.84■□□□□ 0.29
VEGFA-207ENST00000413642 KIR2DL4Q99706 377 aa16.84■□□□□ 0.29
VEGFA-207ENST00000413642 TRBV24-1A0A075B6N3 115 aa16.83■□□□□ 0.28
VEGFA-207ENST00000413642 RNASE13Q5GAN3 156 aaKnown RBP16.83■□□□□ 0.28
VEGFA-207ENST00000413642 C20orf78Q9BR46 151 aa16.83■□□□□ 0.28
VEGFA-207ENST00000413642 UBE2D4Q9Y2X8 147 aa16.83■□□□□ 0.28
VEGFA-207ENST00000413642 IGHV3-64A0A075B6Q5 118 aa16.82■□□□□ 0.28
VEGFA-207ENST00000413642 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-207ENST00000413642 NPYP01303 97 aa16.82■□□□□ 0.28
VEGFA-207ENST00000413642 S100A8P05109 93 aa16.82■□□□□ 0.28
VEGFA-207ENST00000413642 CHTF8P0CG12 524 aa16.82■□□□□ 0.28
VEGFA-207ENST00000413642 F8W036 122 aa16.81■□□□□ 0.28
VEGFA-207ENST00000413642 SS18Q15532 418 aa16.8■□□□□ 0.28
VEGFA-207ENST00000413642 GVQW2A0A096LPI5 108 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-207ENST00000413642 CLLU1Q5K131 121 aa16.79■□□□□ 0.28
VEGFA-207ENST00000413642 LINC00526Q96FQ7 95 aa16.79■□□□□ 0.28
VEGFA-207ENST00000413642 MYCBP2O75592 4640 aa16.79■□□□□ 0.28
VEGFA-207ENST00000413642 RPL32P62910 135 aaKnown RBP16.78■□□□□ 0.28
VEGFA-207ENST00000413642 SMIM2Q9BVW6 85 aa16.78■□□□□ 0.28
VEGFA-207ENST00000413642 IFITM2Q01629 132 aa16.77■□□□□ 0.28
VEGFA-207ENST00000413642 PNRC1Q12796 327 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-207ENST00000413642 CIRBPQ14011 172 aaKnown RBP16.77■□□□□ 0.28
VEGFA-207ENST00000413642 Q6ZUT4 128 aa16.77■□□□□ 0.28
VEGFA-207ENST00000413642 CSDC2Q9Y534 153 aaKnown RBP16.77■□□□□ 0.28
VEGFA-207ENST00000413642 RPL39P62891 51 aaKnown RBP16.76■□□□□ 0.27
VEGFA-207ENST00000413642 CD164L2Q6UWJ8 174 aa16.76■□□□□ 0.27
VEGFA-207ENST00000413642 ATP5L2Q7Z4Y8 100 aa16.76■□□□□ 0.27
VEGFA-207ENST00000413642 TCAPO15273 167 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 MT-ND4LP03901 98 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 COX6A2Q02221 97 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 PRSS3P2Q8NHM4 247 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 DPH3Q96FX2 82 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 HERC1Q15751 4861 aa16.75■□□□□ 0.27
VEGFA-207ENST00000413642 IGHV1-58A0A0C4DH39 117 aa16.74■□□□□ 0.27
VEGFA-207ENST00000413642 TMEM136Q6ZRR5 245 aa16.74■□□□□ 0.27
VEGFA-207ENST00000413642 ANAPC16Q96DE5 110 aa16.74■□□□□ 0.27
VEGFA-207ENST00000413642 TRAV13-1A0A0B4J241 112 aa16.73■□□□□ 0.27
VEGFA-207ENST00000413642 PPBPP02775 128 aa16.73■□□□□ 0.27
VEGFA-207ENST00000413642 RPL37AP61513 92 aaKnown RBP16.73■□□□□ 0.27
VEGFA-207ENST00000413642 SPACA4Q8TDM5 124 aa16.73■□□□□ 0.27
VEGFA-207ENST00000413642 FAM104AQ969W3 186 aa16.73■□□□□ 0.27
VEGFA-207ENST00000413642 OPRPNQ99935 248 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-207ENST00000413642 TIMM21Q9BVV7 248 aa16.73■□□□□ 0.27
VEGFA-207ENST00000413642 A0A087WYN8 130 aa16.72■□□□□ 0.27
VEGFA-207ENST00000413642 ORMDL3Q8N138 153 aa16.72■□□□□ 0.27
VEGFA-207ENST00000413642 TMEM18Q96B42 140 aa16.72■□□□□ 0.27
VEGFA-207ENST00000413642 PRELID3AQ96N28 172 aa16.72■□□□□ 0.27
VEGFA-207ENST00000413642 C1orf196B1AJZ1 125 aa16.71■□□□□ 0.27
VEGFA-207ENST00000413642 PHOX2AO14813 284 aa16.71■□□□□ 0.27
VEGFA-207ENST00000413642 SMAGPQ0VAQ4 97 aa16.71■□□□□ 0.27
VEGFA-207ENST00000413642 ADCYAP1P18509 176 aa16.7■□□□□ 0.26
VEGFA-207ENST00000413642 DMBT1Q9UGM3 2413 aaPredicted RBP16.68■□□□□ 0.26
VEGFA-207ENST00000413642 IGKV2-24A0A0C4DH68 120 aa16.68■□□□□ 0.26
VEGFA-207ENST00000413642 HNRNPA3P51991 378 aaKnown RBP16.68■□□□□ 0.26
VEGFA-207ENST00000413642 J3QL48 77 aa16.67■□□□□ 0.26
VEGFA-207ENST00000413642 C5orf38Q86SI9 138 aa16.67■□□□□ 0.26
VEGFA-207ENST00000413642 LOC389332A0A1B0GUA5 103 aa16.66■□□□□ 0.26
VEGFA-207ENST00000413642 COX7A2LO14548 114 aa16.66■□□□□ 0.26
VEGFA-207ENST00000413642 MAJINQ3KP22 176 aa16.66■□□□□ 0.26
VEGFA-207ENST00000413642 A0A096LNI7 61 aa16.65■□□□□ 0.26
VEGFA-207ENST00000413642 ZNF561-AS1K7EIQ3 104 aa16.65■□□□□ 0.26
VEGFA-207ENST00000413642 MALP21145 153 aa16.65■□□□□ 0.26
VEGFA-207ENST00000413642 SPANXA1Q9NS26 97 aa16.65■□□□□ 0.26
VEGFA-207ENST00000413642 IGLV4-69A0A075B6H9 119 aa16.64■□□□□ 0.25
VEGFA-207ENST00000413642 TMEM218A2RU14 115 aa16.64■□□□□ 0.25
VEGFA-207ENST00000413642 KRTAP29-1A8MX34 341 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-207ENST00000413642 CARD19Q96LW7 228 aa16.64■□□□□ 0.25
VEGFA-207ENST00000413642 PLAC8Q9NZF1 115 aa16.64■□□□□ 0.25
VEGFA-207ENST00000413642 RAB5AP20339 215 aa16.63■□□□□ 0.25
VEGFA-207ENST00000413642 SYCNQ0VAF6 134 aa16.63■□□□□ 0.25
VEGFA-207ENST00000413642 UQCC3Q6UW78 93 aa16.62■□□□□ 0.25
VEGFA-207ENST00000413642 PRSS47A8MTI9 375 aa16.61■□□□□ 0.25
VEGFA-207ENST00000413642 MRPS36P82909 103 aaKnown RBP16.61■□□□□ 0.25
VEGFA-207ENST00000413642 MAP1LC3AQ9H492 121 aa16.6■□□□□ 0.25
VEGFA-207ENST00000413642 Q6ZRU5 148 aa16.59■□□□□ 0.25
VEGFA-207ENST00000413642 STPG4Q8N801 248 aa16.59■□□□□ 0.25
VEGFA-207ENST00000413642 LAMTOR2Q9Y2Q5 125 aa16.59■□□□□ 0.25
VEGFA-207ENST00000413642 IFITM10A6NMD0 228 aa16.58■□□□□ 0.24
VEGFA-207ENST00000413642 Q8N8P6 123 aa16.57■□□□□ 0.24
VEGFA-207ENST00000413642 IFI27P40305 119 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-207ENST00000413642 IMMP2LQ96T52 175 aa16.56■□□□□ 0.24
VEGFA-207ENST00000413642 IGLV4-3A0A075B6K6 122 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms