RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
NEDD1-202ENST00000411739 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 GCSHP23434 173 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 DGAT2L7PQ6IED9 249 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
NEDD1-202ENST00000411739 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 TGIF2-C20orf24A0A0A6YYL0 155 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 CDPF1Q6NVV7 123 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
NEDD1-202ENST00000411739 PHOX2AO14813 284 aa7.84□□□□□ -1.15
NEDD1-202ENST00000411739 RPL32P62910 135 aaKnown RBP7.84□□□□□ -1.15
NEDD1-202ENST00000411739 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
NEDD1-202ENST00000411739 TRAV8-4A0A0B4J246 113 aa7.84□□□□□ -1.16
NEDD1-202ENST00000411739 ZNF25P17030 456 aaPredicted RBP7.84□□□□□ -1.16
NEDD1-202ENST00000411739 NDUFA5Q16718 116 aa7.84□□□□□ -1.16
NEDD1-202ENST00000411739 ZNF664Q8N3J9 261 aa7.84□□□□□ -1.16
NEDD1-202ENST00000411739 MAP1LC3AQ9H492 121 aa7.84□□□□□ -1.16
NEDD1-202ENST00000411739 HSPG2P98160 4391 aa7.84□□□□□ -1.16
NEDD1-202ENST00000411739 TRAV9-1A0A075B6T8 112 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 PRSS1P07477 247 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 RAB5AP20339 215 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 XCL1P47992 114 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 MRPL52Q86TS9 123 aaKnown RBP7.83□□□□□ -1.16
NEDD1-202ENST00000411739 SVBPQ8N300 66 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 NTN5Q8WTR8 489 aaPredicted RBP7.83□□□□□ -1.16
NEDD1-202ENST00000411739 SNAPINO95295 136 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 Q6ZUT4 128 aa7.83□□□□□ -1.16
NEDD1-202ENST00000411739 LINC00959A0A1B0GUT2 108 aa7.82□□□□□ -1.16
NEDD1-202ENST00000411739 FAM30AQ9NZY2 134 aa7.82□□□□□ -1.16
NEDD1-202ENST00000411739 CCL25O15444 150 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
NEDD1-202ENST00000411739 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 FABP9Q0Z7S8 132 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 Q8N8P6 123 aa7.81□□□□□ -1.16
NEDD1-202ENST00000411739 MRPL18Q9H0U6 180 aaKnown RBP7.81□□□□□ -1.16
NEDD1-202ENST00000411739 TMEM18Q96B42 140 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 hDV102S1A0JD36 115 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 CDK2AP2O75956 126 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 XGP55808 180 aa7.8□□□□□ -1.16
NEDD1-202ENST00000411739 FOXI1Q12951 378 aa7.79□□□□□ -1.16
NEDD1-202ENST00000411739 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
NEDD1-202ENST00000411739 SS18Q15532 418 aa7.79□□□□□ -1.16
NEDD1-202ENST00000411739 ALKBH7Q9BT30 221 aaPredicted RBP7.79□□□□□ -1.16
NEDD1-202ENST00000411739 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 C15orf56Q8N910 161 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
NEDD1-202ENST00000411739 SLPIP03973 132 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 CBLN2Q8IUK8 224 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 LINC00526Q96FQ7 95 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 TIMM21Q9BVV7 248 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 DNAH8Q96JB1 4490 aa7.78□□□□□ -1.16
NEDD1-202ENST00000411739 TRAPPC1Q9Y5R8 145 aa7.77□□□□□ -1.17
NEDD1-202ENST00000411739 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
NEDD1-202ENST00000411739 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
NEDD1-202ENST00000411739 PRSS3P2Q8NHM4 247 aa7.77□□□□□ -1.17
NEDD1-202ENST00000411739 SPANXA1Q9NS26 97 aa7.77□□□□□ -1.17
NEDD1-202ENST00000411739 SMAGPQ0VAQ4 97 aa7.76□□□□□ -1.17
NEDD1-202ENST00000411739 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
NEDD1-202ENST00000411739 NXT2Q9NPJ8 142 aaKnown RBP7.76□□□□□ -1.17
NEDD1-202ENST00000411739 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 MT-ND6P03923 174 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 COX19Q49B96 90 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 CYSLTR1Q9Y271 337 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 IGLV4-3A0A075B6K6 122 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 IFITM10A6NMD0 228 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 ORMDL2Q53FV1 153 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 FAT1Q14517 4588 aa7.75□□□□□ -1.17
NEDD1-202ENST00000411739 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
NEDD1-202ENST00000411739 CFAP161Q6P656 301 aa7.74□□□□□ -1.17
NEDD1-202ENST00000411739 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
NEDD1-202ENST00000411739 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
NEDD1-202ENST00000411739 PYGO1Q9Y3Y4 419 aa7.73□□□□□ -1.17
NEDD1-202ENST00000411739 COX7A2LO14548 114 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 MALP21145 153 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 C9orf163Q8N9P6 203 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 SMCO4Q9NRQ5 59 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 PANO1I0J062 215 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 COX6A2Q02221 97 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 FA2HQ7L5A8 372 aa7.72□□□□□ -1.17
NEDD1-202ENST00000411739 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.17
NEDD1-202ENST00000411739 LINC00173Q6ZV60 143 aa7.71□□□□□ -1.17
NEDD1-202ENST00000411739 C18orf32Q8TCD1 76 aa7.71□□□□□ -1.17
NEDD1-202ENST00000411739 URB1-AS1Q96HZ7 61 aa7.71□□□□□ -1.17
NEDD1-202ENST00000411739 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
NEDD1-202ENST00000411739 IGHV1-58A0A0C4DH39 117 aa7.71□□□□□ -1.18
NEDD1-202ENST00000411739 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.18
NEDD1-202ENST00000411739 PMCHL1Q16048 86 aa7.71□□□□□ -1.18
NEDD1-202ENST00000411739 TEX43Q6ZNM6 134 aa7.71□□□□□ -1.18
NEDD1-202ENST00000411739 Q6ZSA8 131 aa7.71□□□□□ -1.18
NEDD1-202ENST00000411739 Q8N1X5 172 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms