RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
PAX3-208ENST00000409828 PSCAO43653 123 aa12.09□□□□□ -0.47
PAX3-208ENST00000409828 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
PAX3-208ENST00000409828 PYGO1Q9Y3Y4 419 aa12.09□□□□□ -0.47
PAX3-208ENST00000409828 A0A1B0GVY2 172 aa12.08□□□□□ -0.48
PAX3-208ENST00000409828 LINC01549A6NIU2 74 aa12.08□□□□□ -0.48
PAX3-208ENST00000409828 ZNF664Q8N3J9 261 aa12.08□□□□□ -0.48
PAX3-208ENST00000409828 IGKV2D-24A0A075B6R9 120 aa12.07□□□□□ -0.48
PAX3-208ENST00000409828 NPSP0C0P6 89 aa12.07□□□□□ -0.48
PAX3-208ENST00000409828 MRPS36P82909 103 aaKnown RBP12.07□□□□□ -0.48
PAX3-208ENST00000409828 C18orf32Q8TCD1 76 aa12.07□□□□□ -0.48
PAX3-208ENST00000409828 CYSLTR1Q9Y271 337 aa12.07□□□□□ -0.48
PAX3-208ENST00000409828 PKD1P98161 4303 aa12.06□□□□□ -0.48
PAX3-208ENST00000409828 CCL25O15444 150 aa12.06□□□□□ -0.48
PAX3-208ENST00000409828 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
PAX3-208ENST00000409828 A0A087WTM6 91 aa12.05□□□□□ -0.48
PAX3-208ENST00000409828 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
PAX3-208ENST00000409828 EREGO14944 169 aa12.05□□□□□ -0.48
PAX3-208ENST00000409828 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
PAX3-208ENST00000409828 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
PAX3-208ENST00000409828 ATP6V1G1O75348 118 aa12.04□□□□□ -0.48
PAX3-208ENST00000409828 RAB5BP61020 215 aa12.04□□□□□ -0.48
PAX3-208ENST00000409828 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
PAX3-208ENST00000409828 FA2HQ7L5A8 372 aa12.04□□□□□ -0.48
PAX3-208ENST00000409828 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
PAX3-208ENST00000409828 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
PAX3-208ENST00000409828 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
PAX3-208ENST00000409828 SCO1O75880 301 aa12.02□□□□□ -0.49
PAX3-208ENST00000409828 TRGC2P03986 189 aa12.02□□□□□ -0.49
PAX3-208ENST00000409828 LINC00614P0C842 121 aa12.02□□□□□ -0.49
PAX3-208ENST00000409828 FAM104AQ969W3 186 aa12.02□□□□□ -0.49
PAX3-208ENST00000409828 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
PAX3-208ENST00000409828 TOMM6Q96B49 74 aa12.01□□□□□ -0.49
PAX3-208ENST00000409828 DNAH11Q96DT5 4516 aa12□□□□□ -0.49
PAX3-208ENST00000409828 IGIPA6NJ69 53 aa12□□□□□ -0.49
PAX3-208ENST00000409828 SS18Q15532 418 aa12□□□□□ -0.49
PAX3-208ENST00000409828 Q6ZUT4 128 aa12□□□□□ -0.49
PAX3-208ENST00000409828 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
PAX3-208ENST00000409828 TIMM17AQ99595 171 aa12□□□□□ -0.49
PAX3-208ENST00000409828 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
PAX3-208ENST00000409828 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
PAX3-208ENST00000409828 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
PAX3-208ENST00000409828 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
PAX3-208ENST00000409828 TMEM141Q96I45 108 aa11.99□□□□□ -0.49
PAX3-208ENST00000409828 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
PAX3-208ENST00000409828 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
PAX3-208ENST00000409828 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
PAX3-208ENST00000409828 ERASQ7Z444 233 aa11.98□□□□□ -0.49
PAX3-208ENST00000409828 CHCHD1Q96BP2 118 aaKnown RBP11.98□□□□□ -0.49
PAX3-208ENST00000409828 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
PAX3-208ENST00000409828 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
PAX3-208ENST00000409828 Q6ZN92 141 aa11.97□□□□□ -0.49
PAX3-208ENST00000409828 Q8N814 137 aa11.97□□□□□ -0.49
PAX3-208ENST00000409828 NTN5Q8WTR8 489 aaPredicted RBP11.97□□□□□ -0.49
PAX3-208ENST00000409828 BAALCQ8WXS3 180 aa11.97□□□□□ -0.49
PAX3-208ENST00000409828 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
PAX3-208ENST00000409828 AMELXQ99217 191 aa11.96□□□□□ -0.49
PAX3-208ENST00000409828 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
PAX3-208ENST00000409828 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
PAX3-208ENST00000409828 GAGE12HA6NDE8 117 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 HBDP02042 147 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 FOXI1Q12951 378 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 WFDC2Q14508 124 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
PAX3-208ENST00000409828 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 SCGB3A1Q96QR1 104 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 VCX2Q9H322 139 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
PAX3-208ENST00000409828 A0A096LNJ9 63 aa11.93□□□□□ -0.5
PAX3-208ENST00000409828 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
PAX3-208ENST00000409828 IFITM10A6NMD0 228 aa11.93□□□□□ -0.5
PAX3-208ENST00000409828 CFAP161Q6P656 301 aa11.93□□□□□ -0.5
PAX3-208ENST00000409828 BAGE3Q86Y29 109 aa11.93□□□□□ -0.5
PAX3-208ENST00000409828 EPPK1P58107 5090 aaKnown RBP11.93□□□□□ -0.5
PAX3-208ENST00000409828 USP17L23D6RBM5 183 aa11.92□□□□□ -0.5
PAX3-208ENST00000409828 XCL1P47992 114 aa11.92□□□□□ -0.5
PAX3-208ENST00000409828 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
PAX3-208ENST00000409828 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
PAX3-208ENST00000409828 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
PAX3-208ENST00000409828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.9□□□□□ -0.5
PAX3-208ENST00000409828 LECT2O14960 151 aa11.9□□□□□ -0.5
PAX3-208ENST00000409828 UBE2D1P51668 147 aa11.9□□□□□ -0.5
PAX3-208ENST00000409828 PDZD11Q5EBL8 140 aa11.9□□□□□ -0.5
PAX3-208ENST00000409828 IGHV3OR16-9A0A0B4J2B5 98 aa11.89□□□□□ -0.51
PAX3-208ENST00000409828 HSBP1O75506 76 aa11.89□□□□□ -0.51
PAX3-208ENST00000409828 SEC11AP67812 179 aa11.89□□□□□ -0.51
PAX3-208ENST00000409828 COX7A2LO14548 114 aa11.88□□□□□ -0.51
PAX3-208ENST00000409828 ATP5LO75964 103 aa11.88□□□□□ -0.51
PAX3-208ENST00000409828 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
PAX3-208ENST00000409828 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
PAX3-208ENST00000409828 IGHV1-58A0A0C4DH39 117 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BKO60814 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BJP06899 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BOP23527 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BBP33778 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BDP58876 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST1H2BCP62807 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST2H2BEQ16778 126 aa11.87□□□□□ -0.51
PAX3-208ENST00000409828 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms