RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 TRAV13-2A0A0B4J235 113 aa5.49□□□□□ -1.53
SH3D19-203ENST00000409598 USP9YO00507 2555 aaPredicted RBP5.49□□□□□ -1.53
SH3D19-203ENST00000409598 TET2Q6N021 2002 aaPredicted RBP5.49□□□□□ -1.53
SH3D19-203ENST00000409598 FOXI1Q12951 378 aa5.49□□□□□ -1.53
SH3D19-203ENST00000409598 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
SH3D19-203ENST00000409598 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
SH3D19-203ENST00000409598 UTF1Q5T230 341 aa5.48□□□□□ -1.53
SH3D19-203ENST00000409598 PRR14LQ5THK1 2151 aa5.48□□□□□ -1.53
SH3D19-203ENST00000409598 UBE2D3P61077 147 aa5.48□□□□□ -1.53
SH3D19-203ENST00000409598 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 FAM167A-AS1Q96KT0 104 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 PRO1854Q9UHT4 67 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
SH3D19-203ENST00000409598 PIK3CD-AS1Q5SR53 167 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 DCANP1Q8TF63 244 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 NTN5Q8WTR8 489 aaPredicted RBP5.47□□□□□ -1.53
SH3D19-203ENST00000409598 LECT2O14960 151 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 NDUFB1O75438 58 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 TNRC6BQ9UPQ9 1833 aaKnown RBP5.47□□□□□ -1.53
SH3D19-203ENST00000409598 F8VRH5 84 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 BRWD1-AS2P59051 145 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 GDF5OSQ5U4N7 250 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 HIGD1BQ9P298 99 aa5.47□□□□□ -1.53
SH3D19-203ENST00000409598 ZFAND2AQ8N6M9 145 aa5.46□□□□□ -1.53
SH3D19-203ENST00000409598 H3BQ85 93 aa5.46□□□□□ -1.53
SH3D19-203ENST00000409598 CFAP126Q5VTH2 177 aa5.46□□□□□ -1.53
SH3D19-203ENST00000409598 REG3GQ6UW15 175 aa5.46□□□□□ -1.53
SH3D19-203ENST00000409598 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 KIAA1549Q9HCM3 1950 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 K7EIL1 84 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 RPL28P46779 137 aaKnown RBP5.46□□□□□ -1.54
SH3D19-203ENST00000409598 EIF4EBP1Q13541 118 aaPredicted RBP5.46□□□□□ -1.54
SH3D19-203ENST00000409598 C20orf173Q96LM9 149 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 ATG2AQ2TAZ0 1938 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
SH3D19-203ENST00000409598 SPANXB1Q9NS25 103 aaPredicted RBP5.46□□□□□ -1.54
SH3D19-203ENST00000409598 ANKRD17O75179 2603 aaKnown RBP5.45□□□□□ -1.54
SH3D19-203ENST00000409598 HIST1H4AP62805 103 aaKnown RBP5.45□□□□□ -1.54
SH3D19-203ENST00000409598 RBMY1FQ15415 496 aaKnown RBP5.45□□□□□ -1.54
SH3D19-203ENST00000409598 GAGE2AQ6NT46 116 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 LINC00310P59036 64 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 KRTAP21-3Q3LHN1 58 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 BAALCQ8WXS3 180 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 MT-ATP8P03928 68 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 IGLV2-8P01709 118 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 MLST8Q9BVC4 326 aa5.45□□□□□ -1.54
SH3D19-203ENST00000409598 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 LINC00467Q9BRT7 94 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 HELZ2Q9BYK8 2649 aaKnown RBP5.44□□□□□ -1.54
SH3D19-203ENST00000409598 A0A1B0GXF2 115 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 C19orf71A6NCJ1 209 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 INAFM2P0DMQ5 153 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 Q6ZUT4 128 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 FAM19A5Q7Z5A7 132 aaPredicted RBP5.44□□□□□ -1.54
SH3D19-203ENST00000409598 ANKRD29Q8N6D5 301 aa5.44□□□□□ -1.54
SH3D19-203ENST00000409598 GATA1P15976 413 aaPredicted RBP5.43□□□□□ -1.54
SH3D19-203ENST00000409598 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
SH3D19-203ENST00000409598 PTH2Q96A98 100 aa5.43□□□□□ -1.54
SH3D19-203ENST00000409598 TRACP01848 142 aa5.43□□□□□ -1.54
SH3D19-203ENST00000409598 RAI1Q7Z5J4 1906 aaPredicted RBP5.43□□□□□ -1.54
SH3D19-203ENST00000409598 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
SH3D19-203ENST00000409598 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
SH3D19-203ENST00000409598 CFC1P0CG37 223 aa5.43□□□□□ -1.54
SH3D19-203ENST00000409598 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
SH3D19-203ENST00000409598 NBDYA0A0U1RRE5 68 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 F8WDY8 70 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 CD164L2Q6UWJ8 174 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 H3BNG1 76 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 C2orf91Q6ZV80 131 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 DIRC1Q969H9 104 aa5.42□□□□□ -1.54
SH3D19-203ENST00000409598 KLLNB2CW77 178 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 E9PLD3 99 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 NEXN-AS1Q8NBZ9 246 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 J3QQQ9 107 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 C20orf203Q8NBC4 194 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 CPAMD8Q8IZJ3 1885 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 A0A096LNT2 108 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 ACANP16112 2415 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 DSCR8Q96T75 97 aa5.41□□□□□ -1.54
SH3D19-203ENST00000409598 NDUFS5O43920 106 aa5.4□□□□□ -1.54
SH3D19-203ENST00000409598 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
SH3D19-203ENST00000409598 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.55
SH3D19-203ENST00000409598 WDR87Q6ZQQ6 2873 aa5.4□□□□□ -1.55
SH3D19-203ENST00000409598 KRTAP1-3Q8IUG1 177 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 PLAC8L1A1L4L8 177 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 USP17L23D6RBM5 183 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 LYPD5Q6UWN5 251 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 C1orf158Q8N1D5 194 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 J3KT08 172 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 IGLV2-11P01706 119 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 UBE2D2P62837 147 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 SPANXCQ9NY87 97 aa5.39□□□□□ -1.55
SH3D19-203ENST00000409598 LINC01620Q4KN68 170 aa5.38□□□□□ -1.55
SH3D19-203ENST00000409598 OPRPNQ99935 248 aaPredicted RBP5.38□□□□□ -1.55
SH3D19-203ENST00000409598 TCL1BO95988 128 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms