RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TGP01266 2768 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 NCR2O95944 276 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 IFNA17P01571 189 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 IL5P05113 134 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 SCGB1A1P11684 91 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 NEFHP12036 1026 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 S100A7L2Q5SY68 101 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 ZNF818PQ6ZRF7 136 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 CTAGE3PQ8IX95 158 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 SMIM4Q8WVI0 70 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 LINC00472Q9H8W2 130 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 SPANXA1Q9NS26 97 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 NSD3Q9BZ95 1437 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 KIF21AQ7Z4S6 1674 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 MYO7BQ6PIF6 2116 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 CHD8Q9HCK8 2581 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 ARPC5O15511 151 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 TNFP01375 233 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 CBLN1P23435 193 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 CKS1BP61024 79 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 COX17Q14061 63 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 MAFIPQ8WZ33 124 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 TULP4Q9NRJ4 1543 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 ARHGEF12Q9NZN5 1544 aa-0.58□□□□□ -2.5
PMS1-203ENST00000409593 FHAD1B1AJZ9 1412 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 DNAH6Q9C0G6 4158 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 RRAS2P62070 204 aaPredicted RBP-0.59□□□□□ -2.5
PMS1-203ENST00000409593 CCL8P80075 99 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 DEFB112Q30KQ8 113 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 RPL7L1Q6DKI1 246 aaKnown RBP-0.59□□□□□ -2.5
PMS1-203ENST00000409593 DEFB105AQ8NG35 78 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 PKHD1L1Q86WI1 4243 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 SBF2Q86WG5 1849 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 RIMS1Q86UR5 1692 aaKnown RBP-0.59□□□□□ -2.5
PMS1-203ENST00000409593 ITPR3Q14573 2671 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 MYOM3Q5VTT5 1437 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 ANKRD30AQ9BXX3 1397 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 CTXND1A0A1B0GTU2 59 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 Q6JHZ5 121 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 R4GMQ9 66 aa-0.59□□□□□ -2.5
PMS1-203ENST00000409593 ZNF236Q9UL36 1845 aa-0.6□□□□□ -2.5
PMS1-203ENST00000409593 MUC17Q685J3 4493 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 A6NIN4 97 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 M0R135 149 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 PPP1R17O96001 155 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 PIPP12273 146 aaPredicted RBP-0.6□□□□□ -2.51
PMS1-203ENST00000409593 ALX1Q15699 326 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 SPTSSAQ969W0 71 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 AMELXQ99217 191 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 PSMG3Q9BT73 122 aaPredicted RBP-0.6□□□□□ -2.51
PMS1-203ENST00000409593 RAPGEF6Q8TEU7 1601 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 PTPN23Q9H3S7 1636 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 ADAMTS12P58397 1594 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 HMGXB3Q12766 1538 aa-0.6□□□□□ -2.51
PMS1-203ENST00000409593 IFT140Q96RY7 1462 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 SPAARA0A1B0GVQ0 90 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 SYS1-DBNDD2H3BUS1 97 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 NDUFB6O95139 128 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 SIX6O95475 246 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 TMEM170BQ5T4T1 132 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 GSKIPQ9P0R6 139 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 LENEPQ9Y5L5 61 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 V9GYH0 126 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 USP9YO00507 2555 aaPredicted RBP-0.61□□□□□ -2.51
PMS1-203ENST00000409593 POLA1P09884 1462 aaPredicted RBP-0.61□□□□□ -2.51
PMS1-203ENST00000409593 COL4A6Q14031 1691 aa-0.61□□□□□ -2.51
PMS1-203ENST00000409593 NBPF19A0A087WUL8 3843 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 TRBV7-4A0A0J9YYF1 115 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 M0R2Z0 102 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 SNCGO76070 127 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 IFNGP01579 166 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 MT1AP04731 61 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 Q6AWC8 147 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 SCIMPQ6UWF3 145 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 SEC11CQ9BY50 192 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 MAGI1Q96QZ7 1491 aaPredicted RBP-0.62□□□□□ -2.51
PMS1-203ENST00000409593 EPG5Q9HCE0 2579 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 SETBP1Q9Y6X0 1596 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 PAPPA2Q9BXP8 1791 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 SLIT1O75093 1534 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 HCG22E2RYF7 251 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 K7ERU9 68 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 UQCR11O14957 56 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 COX8AP10176 69 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 AKAP14Q86UN6 197 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 PYDC1Q8WXC3 89 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 NAA60Q9H7X0 242 aa-0.62□□□□□ -2.51
PMS1-203ENST00000409593 ZNF518AQ6AHZ1 1483 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 SHANK2Q9UPX8 1470 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 ZFHX3Q15911 3703 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 MYOM1P52179 1685 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 DOCK1Q14185 1865 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 DNAJC13O75165 2243 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 DNAH3Q8TD57 4116 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 CEP152O94986 1710 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 FMN2Q9NZ56 1722 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 MYH8P13535 1937 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 PI4KAP42356 2102 aa-0.63□□□□□ -2.51
PMS1-203ENST00000409593 URB1O60287 2271 aaKnown RBP-0.63□□□□□ -2.51
PMS1-203ENST00000409593 J3QR89 54 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms