RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
PCDHA13-202ENST00000409494 Q8N976 141 aa12.37□□□□□ -0.43
PCDHA13-202ENST00000409494 MRPS12O15235 138 aaKnown RBP12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 ACYP1P07311 99 aa12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
PCDHA13-202ENST00000409494 ODF3L2Q3SX64 289 aa12.35□□□□□ -0.43
PCDHA13-202ENST00000409494 Q8N2B8 174 aa12.35□□□□□ -0.43
PCDHA13-202ENST00000409494 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
PCDHA13-202ENST00000409494 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
PCDHA13-202ENST00000409494 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 UBE2AP49459 152 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 MIR7-3HGQ8N6C7 128 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 DAND5Q8N907 189 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
PCDHA13-202ENST00000409494 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.43
PCDHA13-202ENST00000409494 IGHV4-30-4P0DP06 118 aa12.33□□□□□ -0.43
PCDHA13-202ENST00000409494 RAI1Q7Z5J4 1906 aaPredicted RBP12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 P0DMU3 169 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 MAPKAPK5-AS1Q8N8E1 139 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 SMR3AQ99954 134 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 PTH2Q96A98 100 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 TRBV10-2A0A0K0K1G8 114 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 IBA57-AS1B1ANH7 110 aa12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 MRPS36P82909 103 aaKnown RBP12.33□□□□□ -0.44
PCDHA13-202ENST00000409494 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
PCDHA13-202ENST00000409494 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
PCDHA13-202ENST00000409494 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
PCDHA13-202ENST00000409494 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
PCDHA13-202ENST00000409494 H3BT86 120 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 JMJD1CQ15652 2540 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 PDE6GP18545 87 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 RBX1P62877 108 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 TNRC6BQ9UPQ9 1833 aaKnown RBP12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 USP9YO00507 2555 aaPredicted RBP12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 HAMPP81172 84 aa12.31□□□□□ -0.44
PCDHA13-202ENST00000409494 TCL1BO95988 128 aa12.3□□□□□ -0.44
PCDHA13-202ENST00000409494 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
PCDHA13-202ENST00000409494 B5MCH6 92 aa12.3□□□□□ -0.44
PCDHA13-202ENST00000409494 NRACQ8N912 160 aa12.3□□□□□ -0.44
PCDHA13-202ENST00000409494 PROK1P58294 105 aa12.29□□□□□ -0.44
PCDHA13-202ENST00000409494 CEMP1Q6PRD7 247 aaPredicted RBP12.29□□□□□ -0.44
PCDHA13-202ENST00000409494 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
PCDHA13-202ENST00000409494 ZNF462Q96JM2 2506 aa12.29□□□□□ -0.44
PCDHA13-202ENST00000409494 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
PCDHA13-202ENST00000409494 A0A0B4J2C4 111 aa12.28□□□□□ -0.44
PCDHA13-202ENST00000409494 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
PCDHA13-202ENST00000409494 SPANXB1Q9NS25 103 aaPredicted RBP12.28□□□□□ -0.44
PCDHA13-202ENST00000409494 PRR9Q5T870 116 aa12.28□□□□□ -0.44
PCDHA13-202ENST00000409494 CDKN2A-AS1Q9UH64 79 aa12.27□□□□□ -0.44
PCDHA13-202ENST00000409494 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.44
PCDHA13-202ENST00000409494 CLEC2BQ92478 149 aa12.27□□□□□ -0.44
PCDHA13-202ENST00000409494 B9D2Q9BPU9 175 aa12.27□□□□□ -0.44
PCDHA13-202ENST00000409494 TLN2Q9Y4G6 2542 aa12.27□□□□□ -0.44
PCDHA13-202ENST00000409494 NUPR2A6NF83 97 aa12.26□□□□□ -0.45
PCDHA13-202ENST00000409494 C4orf48Q5BLP8 95 aa12.26□□□□□ -0.45
PCDHA13-202ENST00000409494 TMEM223A0PJW6 202 aa12.26□□□□□ -0.45
PCDHA13-202ENST00000409494 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
PCDHA13-202ENST00000409494 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 UBE2D3P61077 147 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 UBE2D2P62837 147 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 TIMM17BO60830 172 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 COX7BP24311 80 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 TSHBP01222 138 aa12.25□□□□□ -0.45
PCDHA13-202ENST00000409494 NDUFB1O75438 58 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 WFDC10AQ9H1F0 79 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 PTPRBP23467 1997 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 DOPEY1Q5JWR5 2465 aa12.24□□□□□ -0.45
PCDHA13-202ENST00000409494 HIST2H2BDQ6DRA6 164 aa12.23□□□□□ -0.45
PCDHA13-202ENST00000409494 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
PCDHA13-202ENST00000409494 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
PCDHA13-202ENST00000409494 NCR3O14931 201 aa12.22□□□□□ -0.45
PCDHA13-202ENST00000409494 TRACP01848 142 aa12.22□□□□□ -0.45
PCDHA13-202ENST00000409494 NHLRC4P0CG21 123 aaPredicted RBP12.21□□□□□ -0.45
PCDHA13-202ENST00000409494 FASNP49327 2511 aaKnown RBP12.21□□□□□ -0.45
PCDHA13-202ENST00000409494 SS18L2Q9UHA2 77 aa12.21□□□□□ -0.46
PCDHA13-202ENST00000409494 CEP350Q5VT06 3117 aa12.2□□□□□ -0.46
PCDHA13-202ENST00000409494 IGLV4-69A0A075B6H9 119 aa12.19□□□□□ -0.46
PCDHA13-202ENST00000409494 LECT2O14960 151 aa12.19□□□□□ -0.46
PCDHA13-202ENST00000409494 BEAN1Q3B7T3 259 aa12.19□□□□□ -0.46
PCDHA13-202ENST00000409494 UBE2D4Q9Y2X8 147 aa12.19□□□□□ -0.46
PCDHA13-202ENST00000409494 FN1P02751 2386 aaKnown RBP12.18□□□□□ -0.46
PCDHA13-202ENST00000409494 A0A0J9YWU9 116 aa12.18□□□□□ -0.46
PCDHA13-202ENST00000409494 FAM236AA0A1B0GUQ0 79 aa12.18□□□□□ -0.46
PCDHA13-202ENST00000409494 FAM236BA0A1B0GV22 79 aa12.18□□□□□ -0.46
PCDHA13-202ENST00000409494 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
PCDHA13-202ENST00000409494 hADV29S1A0JD25 119 aa12.17□□□□□ -0.46
PCDHA13-202ENST00000409494 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
PCDHA13-202ENST00000409494 COX17Q14061 63 aa12.17□□□□□ -0.46
PCDHA13-202ENST00000409494 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms