RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCAMP4-202ENST00000409472 BAHCC1Q9P281 2608 aa11□□□□□ -0.65
SCAMP4-202ENST00000409472 ZNF415Q09FC8 603 aa11□□□□□ -0.65
SCAMP4-202ENST00000409472 SFTA2Q6UW10 78 aa11□□□□□ -0.65
SCAMP4-202ENST00000409472 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
SCAMP4-202ENST00000409472 C16orf95Q9H693 158 aa11□□□□□ -0.65
SCAMP4-202ENST00000409472 NSUN5P1Q3KNT7 163 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 C1orf158Q8N1D5 194 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 ZNRF2Q8NHG8 242 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 TENM1Q9UKZ4 2725 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
SCAMP4-202ENST00000409472 SLC25A20O43772 301 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 HILS1P60008 231 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 PMVKQ15126 192 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 STHQ8IWL8 128 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 SPXQ9BT56 116 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 I3L3M4 83 aa10.98□□□□□ -0.65
SCAMP4-202ENST00000409472 CEMP1Q6PRD7 247 aaPredicted RBP10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 NDUFA11Q86Y39 141 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 C20orf203Q8NBC4 194 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 TRAV25A0A0B4J276 109 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 CRLF1O75462 422 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 TSPEAR-AS2P59090 65 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 KRTAP10-3P60369 221 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 PLEKHB2Q96CS7 222 aa10.97□□□□□ -0.65
SCAMP4-202ENST00000409472 ZNF815PA8K554 130 aa10.96□□□□□ -0.65
SCAMP4-202ENST00000409472 RHOHQ15669 191 aa10.96□□□□□ -0.65
SCAMP4-202ENST00000409472 C5orf47Q569G3 176 aa10.96□□□□□ -0.65
SCAMP4-202ENST00000409472 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
SCAMP4-202ENST00000409472 TMEM141Q96I45 108 aa10.96□□□□□ -0.65
SCAMP4-202ENST00000409472 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.66
SCAMP4-202ENST00000409472 C2CD3Q4AC94 2353 aa10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 FN1P02751 2386 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 GIG44P09565 113 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 EDA2RQ9HAV5 297 aa10.95□□□□□ -0.66
SCAMP4-202ENST00000409472 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 C10orf126Q8N4M7 172 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 C9JAW5 83 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 LY6G6DO95868 133 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
SCAMP4-202ENST00000409472 BEAN1Q3B7T3 259 aa10.93□□□□□ -0.66
SCAMP4-202ENST00000409472 C15orf53Q8NAA6 179 aa10.93□□□□□ -0.66
SCAMP4-202ENST00000409472 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
SCAMP4-202ENST00000409472 HIVEP1P15822 2718 aa10.93□□□□□ -0.66
SCAMP4-202ENST00000409472 IGLV1-51P01701 117 aa10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 C19orf73Q9NVV2 129 aa10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 Q6ZTI0 123 aa10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 DNAJC30Q96LL9 226 aa10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
SCAMP4-202ENST00000409472 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 PRO1854Q9UHT4 67 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 IGHV3-64A0A075B6Q5 118 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 A0A0J9YXV3 536 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 RS1O15537 224 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 CHCHD7Q9BUK0 85 aa10.91□□□□□ -0.66
SCAMP4-202ENST00000409472 NTN5Q8WTR8 489 aaPredicted RBP10.9□□□□□ -0.66
SCAMP4-202ENST00000409472 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.66
SCAMP4-202ENST00000409472 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 NDUFA7O95182 113 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 CFC1BP0CG36 223 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 CFC1P0CG37 223 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 LINC01600Q96MT4 127 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 AMELXQ99217 191 aa10.89□□□□□ -0.67
SCAMP4-202ENST00000409472 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
SCAMP4-202ENST00000409472 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
SCAMP4-202ENST00000409472 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
SCAMP4-202ENST00000409472 PLAC8L1A1L4L8 177 aa10.88□□□□□ -0.67
SCAMP4-202ENST00000409472 HERVK_113P61574 105 aa10.88□□□□□ -0.67
SCAMP4-202ENST00000409472 ATXN8Q156A1 80 aa10.87□□□□□ -0.67
SCAMP4-202ENST00000409472 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
SCAMP4-202ENST00000409472 NOP10Q9NPE3 64 aaKnown RBP10.87□□□□□ -0.67
SCAMP4-202ENST00000409472 A0A0J9YY99 117 aa10.87□□□□□ -0.67
SCAMP4-202ENST00000409472 TMEM223A0PJW6 202 aa10.86□□□□□ -0.67
SCAMP4-202ENST00000409472 TMEM263Q8WUH6 116 aaKnown RBP10.86□□□□□ -0.67
SCAMP4-202ENST00000409472 UBE2WQ96B02 151 aa10.86□□□□□ -0.67
SCAMP4-202ENST00000409472 UBE2D4Q9Y2X8 147 aa10.86□□□□□ -0.67
SCAMP4-202ENST00000409472 IGHV3-30P01768 117 aa10.85□□□□□ -0.67
SCAMP4-202ENST00000409472 IGHV3-30-5P0DP03 117 aa10.85□□□□□ -0.67
SCAMP4-202ENST00000409472 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
SCAMP4-202ENST00000409472 J3QQQ9 107 aa10.85□□□□□ -0.67
SCAMP4-202ENST00000409472 FAM240AA0A1B0GVK7 77 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 CSNK1G2-AS1Q8NCQ2 148 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 CHCHD5Q9BSY4 110 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 SPANXCQ9NY87 97 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 ATRQ13535 2644 aa10.84□□□□□ -0.67
SCAMP4-202ENST00000409472 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms