RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ITPR3Q14573 2671 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 MXRA5Q9NR99 2828 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 TINCRA0A1B0GVN0 87 aa11.31□□□□□ -0.6
LIMS2-205ENST00000409455 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
LIMS2-205ENST00000409455 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
LIMS2-205ENST00000409455 UNC79Q9P2D8 2635 aa11.3□□□□□ -0.6
LIMS2-205ENST00000409455 TIMM17BO60830 172 aa11.3□□□□□ -0.6
LIMS2-205ENST00000409455 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
LIMS2-205ENST00000409455 LINC01587Q99440 93 aa11.3□□□□□ -0.6
LIMS2-205ENST00000409455 A8MZ25 164 aa11.29□□□□□ -0.6
LIMS2-205ENST00000409455 EDN2P20800 178 aa11.29□□□□□ -0.6
LIMS2-205ENST00000409455 SNRPD3P62318 126 aaKnown RBP11.29□□□□□ -0.6
LIMS2-205ENST00000409455 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
LIMS2-205ENST00000409455 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
LIMS2-205ENST00000409455 K7EMT4 169 aa11.28□□□□□ -0.6
LIMS2-205ENST00000409455 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
LIMS2-205ENST00000409455 Q6YL49 198 aa11.27□□□□□ -0.61
LIMS2-205ENST00000409455 DAND5Q8N907 189 aa11.27□□□□□ -0.61
LIMS2-205ENST00000409455 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
LIMS2-205ENST00000409455 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.61
LIMS2-205ENST00000409455 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
LIMS2-205ENST00000409455 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
LIMS2-205ENST00000409455 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
LIMS2-205ENST00000409455 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
LIMS2-205ENST00000409455 HECTD1Q9ULT8 2610 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 DUX5Q96PT3 197 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 SONP18583 2426 aaKnown RBP11.25□□□□□ -0.61
LIMS2-205ENST00000409455 C9orf153Q5TBE3 101 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-205ENST00000409455 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
LIMS2-205ENST00000409455 COX7A2LO14548 114 aa11.24□□□□□ -0.61
LIMS2-205ENST00000409455 NDUFA1O15239 70 aa11.24□□□□□ -0.61
LIMS2-205ENST00000409455 IGLV1-40P01703 118 aa11.23□□□□□ -0.61
LIMS2-205ENST00000409455 C3orf22Q8N5N4 141 aa11.23□□□□□ -0.61
LIMS2-205ENST00000409455 ACANP16112 2415 aa11.23□□□□□ -0.61
LIMS2-205ENST00000409455 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
LIMS2-205ENST00000409455 ATP5G1P05496 136 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 PROK1P58294 105 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 CFHR3Q02985 330 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-205ENST00000409455 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-205ENST00000409455 UQCRQO14949 82 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 CDKN2A-AS1Q9UH64 79 aa11.22□□□□□ -0.61
LIMS2-205ENST00000409455 AKAP9Q99996 3911 aa11.21□□□□□ -0.61
LIMS2-205ENST00000409455 NDUFA7O95182 113 aa11.21□□□□□ -0.61
LIMS2-205ENST00000409455 HTN1P15515 57 aa11.21□□□□□ -0.61
LIMS2-205ENST00000409455 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
LIMS2-205ENST00000409455 C10orf99Q6UWK7 81 aa11.2□□□□□ -0.62
LIMS2-205ENST00000409455 DAZ4Q86SG3 579 aaKnown RBP11.2□□□□□ -0.62
LIMS2-205ENST00000409455 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
LIMS2-205ENST00000409455 DAZ3Q9NR90 486 aaKnown RBP11.2□□□□□ -0.62
LIMS2-205ENST00000409455 K7EQG2 157 aa11.2□□□□□ -0.62
LIMS2-205ENST00000409455 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
LIMS2-205ENST00000409455 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
LIMS2-205ENST00000409455 TRACP01848 142 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 Q9H8V8 135 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 PSMB8P28062 276 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 TIRAPP58753 221 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
LIMS2-205ENST00000409455 CXCL5P42830 114 aa11.17□□□□□ -0.62
LIMS2-205ENST00000409455 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
LIMS2-205ENST00000409455 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
LIMS2-205ENST00000409455 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
LIMS2-205ENST00000409455 BAALC-AS2P0C853 105 aa11.17□□□□□ -0.62
LIMS2-205ENST00000409455 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
LIMS2-205ENST00000409455 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
LIMS2-205ENST00000409455 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
LIMS2-205ENST00000409455 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
LIMS2-205ENST00000409455 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
LIMS2-205ENST00000409455 Q9UF83 564 aa11.16□□□□□ -0.62
LIMS2-205ENST00000409455 HERVK_113P63121 156 aa11.15□□□□□ -0.62
LIMS2-205ENST00000409455 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
LIMS2-205ENST00000409455 MYO9AB2RTY4 2548 aa11.15□□□□□ -0.62
LIMS2-205ENST00000409455 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.62
LIMS2-205ENST00000409455 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.62
LIMS2-205ENST00000409455 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
LIMS2-205ENST00000409455 Q8N2B8 174 aa11.15□□□□□ -0.62
LIMS2-205ENST00000409455 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
LIMS2-205ENST00000409455 CUBNO60494 3623 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 FAM222AQ5U5X8 452 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 Q6ZSN1 163 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 C5orf38Q86SI9 138 aa11.14□□□□□ -0.63
LIMS2-205ENST00000409455 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
LIMS2-205ENST00000409455 COX7CP15954 63 aa11.12□□□□□ -0.63
LIMS2-205ENST00000409455 COX6A2Q02221 97 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms