RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 SORL1Q92673 2214 aa9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
HERC3-203ENST00000407637 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
HERC3-203ENST00000407637 COPS9Q8WXC6 57 aa9.25□□□□□ -0.93
HERC3-203ENST00000407637 NDUFA4O00483 81 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 EDN2P20800 178 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 MINOS1-NBL1R4GNA1 71 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 WFDC11Q8NEX6 87 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 PIMREGQ9BSJ6 248 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
HERC3-203ENST00000407637 EPM2AB3EWF7 344 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 IGHV3-11P01762 117 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 ANKHD1Q8IWZ3 2542 aaKnown RBP9.23□□□□□ -0.93
HERC3-203ENST00000407637 IGHV1OR15-1A0A075B7D0 117 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.23□□□□□ -0.93
HERC3-203ENST00000407637 CRPP02741 224 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 TMEM86BQ8N661 226 aa9.23□□□□□ -0.93
HERC3-203ENST00000407637 AKAP13Q12802 2813 aa9.22□□□□□ -0.93
HERC3-203ENST00000407637 XCL1P47992 114 aa9.22□□□□□ -0.93
HERC3-203ENST00000407637 FAM19A1Q7Z5A9 133 aa9.22□□□□□ -0.93
HERC3-203ENST00000407637 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
HERC3-203ENST00000407637 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
HERC3-203ENST00000407637 KNCNA6PVL3 124 aa9.21□□□□□ -0.93
HERC3-203ENST00000407637 PSMB8P28062 276 aa9.21□□□□□ -0.93
HERC3-203ENST00000407637 C16orf95Q9H693 158 aa9.21□□□□□ -0.93
HERC3-203ENST00000407637 AVPP01185 164 aa9.21□□□□□ -0.94
HERC3-203ENST00000407637 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.94
HERC3-203ENST00000407637 GVINP1Q7Z2Y8 2422 aa9.21□□□□□ -0.94
HERC3-203ENST00000407637 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 SMIM1B2RUZ4 78 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 H7BZZ5 65 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 LECT2O14960 151 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 SLPIP03973 132 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 OVOL2Q9BRP0 275 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 AKAP6Q13023 2319 aa9.2□□□□□ -0.94
HERC3-203ENST00000407637 Q6ZSN1 163 aa9.19□□□□□ -0.94
HERC3-203ENST00000407637 C5orf56Q8N8D9 126 aa9.19□□□□□ -0.94
HERC3-203ENST00000407637 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
HERC3-203ENST00000407637 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
HERC3-203ENST00000407637 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
HERC3-203ENST00000407637 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 HTN1P15515 57 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
HERC3-203ENST00000407637 SAA4P35542 130 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 LINC00242Q5T6M2 205 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 SPTA1P02549 2419 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 MIR7-3HGQ8N6C7 128 aa9.18□□□□□ -0.94
HERC3-203ENST00000407637 HRNRQ86YZ3 2850 aaPredicted RBP9.17□□□□□ -0.94
HERC3-203ENST00000407637 PF4P02776 101 aa9.17□□□□□ -0.94
HERC3-203ENST00000407637 ACACAQ13085 2346 aa9.17□□□□□ -0.94
HERC3-203ENST00000407637 SS18Q15532 418 aa9.17□□□□□ -0.94
HERC3-203ENST00000407637 C19orf54Q5BKX5 351 aa9.17□□□□□ -0.94
HERC3-203ENST00000407637 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
HERC3-203ENST00000407637 ANKRD11Q6UB99 2663 aaPredicted RBP9.16□□□□□ -0.94
HERC3-203ENST00000407637 CCKP06307 115 aa9.16□□□□□ -0.94
HERC3-203ENST00000407637 SIRPDQ9H106 197 aa9.16□□□□□ -0.94
HERC3-203ENST00000407637 A0A0U1RQV1 116 aa9.16□□□□□ -0.94
HERC3-203ENST00000407637 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
HERC3-203ENST00000407637 CELSR1Q9NYQ6 3014 aa9.15□□□□□ -0.94
HERC3-203ENST00000407637 LINC01560Q8TB33 94 aa9.15□□□□□ -0.94
HERC3-203ENST00000407637 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 PRM2P04554 102 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 SEC61GP60059 68 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 IGFL3Q6UXB1 125 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 BRK1Q8WUW1 75 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
HERC3-203ENST00000407637 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
HERC3-203ENST00000407637 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
HERC3-203ENST00000407637 H0YGX0 51 aa9.13□□□□□ -0.95
HERC3-203ENST00000407637 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.13□□□□□ -0.95
HERC3-203ENST00000407637 SPTAN1Q13813 2472 aaKnown RBP9.13□□□□□ -0.95
HERC3-203ENST00000407637 RMI2Q96E14 147 aa9.12□□□□□ -0.95
HERC3-203ENST00000407637 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
HERC3-203ENST00000407637 V9GYY9 64 aa9.12□□□□□ -0.95
HERC3-203ENST00000407637 EP300Q09472 2414 aaPredicted RBP9.12□□□□□ -0.95
HERC3-203ENST00000407637 C1orf195Q5TG92 126 aa9.11□□□□□ -0.95
HERC3-203ENST00000407637 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
HERC3-203ENST00000407637 MOB4Q9Y3A3 225 aa9.11□□□□□ -0.95
HERC3-203ENST00000407637 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
HERC3-203ENST00000407637 F8WEM9 126 aa9.1□□□□□ -0.95
HERC3-203ENST00000407637 CDSNQ15517 529 aa9.1□□□□□ -0.95
HERC3-203ENST00000407637 Q96MF0 132 aa9.1□□□□□ -0.95
HERC3-203ENST00000407637 GRNP28799 593 aaKnown RBP9.09□□□□□ -0.95
HERC3-203ENST00000407637 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
HERC3-203ENST00000407637 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms