RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
ATG4B-205ENST00000404914 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
ATG4B-205ENST00000404914 TINCRA0A1B0GVN0 87 aa11.27□□□□□ -0.61
ATG4B-205ENST00000404914 Q8N2B8 174 aa11.27□□□□□ -0.61
ATG4B-205ENST00000404914 COX6A2Q02221 97 aa11.26□□□□□ -0.61
ATG4B-205ENST00000404914 ANKRD17O75179 2603 aaKnown RBP11.26□□□□□ -0.61
ATG4B-205ENST00000404914 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
ATG4B-205ENST00000404914 LINC01587Q99440 93 aa11.26□□□□□ -0.61
ATG4B-205ENST00000404914 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 ZANQ9Y493 2812 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 AVPP01185 164 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 UNC79Q9P2D8 2635 aa11.25□□□□□ -0.61
ATG4B-205ENST00000404914 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
ATG4B-205ENST00000404914 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
ATG4B-205ENST00000404914 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
ATG4B-205ENST00000404914 PSMB8P28062 276 aa11.24□□□□□ -0.61
ATG4B-205ENST00000404914 KRTAP10-9P60411 292 aa11.24□□□□□ -0.61
ATG4B-205ENST00000404914 NDUFA7O95182 113 aa11.23□□□□□ -0.61
ATG4B-205ENST00000404914 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
ATG4B-205ENST00000404914 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
ATG4B-205ENST00000404914 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
ATG4B-205ENST00000404914 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
ATG4B-205ENST00000404914 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
ATG4B-205ENST00000404914 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
ATG4B-205ENST00000404914 Q9H8V8 135 aa11.22□□□□□ -0.61
ATG4B-205ENST00000404914 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
ATG4B-205ENST00000404914 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.62
ATG4B-205ENST00000404914 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.62
ATG4B-205ENST00000404914 NDUFA1O15239 70 aa11.2□□□□□ -0.62
ATG4B-205ENST00000404914 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
ATG4B-205ENST00000404914 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
ATG4B-205ENST00000404914 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
ATG4B-205ENST00000404914 NAV2Q8IVL1 2488 aa11.19□□□□□ -0.62
ATG4B-205ENST00000404914 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
ATG4B-205ENST00000404914 PDZD2O15018 2839 aa11.19□□□□□ -0.62
ATG4B-205ENST00000404914 TIMM17BO60830 172 aa11.19□□□□□ -0.62
ATG4B-205ENST00000404914 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
ATG4B-205ENST00000404914 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
ATG4B-205ENST00000404914 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
ATG4B-205ENST00000404914 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
ATG4B-205ENST00000404914 COX7A2LO14548 114 aa11.18□□□□□ -0.62
ATG4B-205ENST00000404914 DEFB131AP59861 70 aa11.18□□□□□ -0.62
ATG4B-205ENST00000404914 BEAN1Q3B7T3 259 aa11.18□□□□□ -0.62
ATG4B-205ENST00000404914 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
ATG4B-205ENST00000404914 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
ATG4B-205ENST00000404914 LINC00694P0DN24 101 aa11.17□□□□□ -0.62
ATG4B-205ENST00000404914 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
ATG4B-205ENST00000404914 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
ATG4B-205ENST00000404914 MXRA5Q9NR99 2828 aa11.16□□□□□ -0.62
ATG4B-205ENST00000404914 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
ATG4B-205ENST00000404914 LINC00242Q5T6M2 205 aa11.16□□□□□ -0.62
ATG4B-205ENST00000404914 FLNBO75369 2602 aaKnown RBP11.16□□□□□ -0.62
ATG4B-205ENST00000404914 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
ATG4B-205ENST00000404914 DEFB136Q30KP8 78 aa11.15□□□□□ -0.62
ATG4B-205ENST00000404914 PIK3CD-AS1Q5SR53 167 aa11.15□□□□□ -0.62
ATG4B-205ENST00000404914 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
ATG4B-205ENST00000404914 CCL19Q99731 98 aa11.15□□□□□ -0.62
ATG4B-205ENST00000404914 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-205ENST00000404914 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-205ENST00000404914 TIRAPP58753 221 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 RNF152Q8N8N0 203 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 C10orf105Q8TEF2 133 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 Q9HAA7 133 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 SMIM1B2RUZ4 78 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 NOTCH2Q04721 2471 aa11.14□□□□□ -0.63
ATG4B-205ENST00000404914 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 DEFB112Q30KQ8 113 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 DGAT2L7PQ6IED9 249 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
ATG4B-205ENST00000404914 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
ATG4B-205ENST00000404914 CIRBPQ14011 172 aaKnown RBP11.12□□□□□ -0.63
ATG4B-205ENST00000404914 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
ATG4B-205ENST00000404914 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
ATG4B-205ENST00000404914 MSMBP08118 114 aa11.11□□□□□ -0.63
ATG4B-205ENST00000404914 SLURP1P55000 103 aa11.11□□□□□ -0.63
ATG4B-205ENST00000404914 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
ATG4B-205ENST00000404914 RS1O15537 224 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 LINC00643Q86TS7 51 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 ACYP1P07311 99 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 Q96MF0 132 aa11.1□□□□□ -0.63
ATG4B-205ENST00000404914 TMEM89A2RUT3 159 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 IMUPQ9GZP8 106 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 SETXQ7Z333 2677 aaKnown RBP11.09□□□□□ -0.63
ATG4B-205ENST00000404914 MYO9AB2RTY4 2548 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 LOC107984640A0A0U1RRK4 108 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
ATG4B-205ENST00000404914 GAGE2AQ6NT46 116 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms