RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RYR1P21817 5038 aa12.57□□□□□ -0.4
RTN4-207ENST00000402434 PRSS47A8MTI9 375 aa12.57□□□□□ -0.4
RTN4-207ENST00000402434 RHEBQ15382 184 aa12.57□□□□□ -0.4
RTN4-207ENST00000402434 CDC42SE2Q9NRR3 84 aa12.57□□□□□ -0.4
RTN4-207ENST00000402434 IGKV3OR2-268A0A0C4DH90 116 aa12.55□□□□□ -0.4
RTN4-207ENST00000402434 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
RTN4-207ENST00000402434 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
RTN4-207ENST00000402434 S100PP25815 95 aa12.54□□□□□ -0.4
RTN4-207ENST00000402434 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
RTN4-207ENST00000402434 TMEM18Q96B42 140 aa12.54□□□□□ -0.4
RTN4-207ENST00000402434 TIMM21Q9BVV7 248 aa12.54□□□□□ -0.4
RTN4-207ENST00000402434 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
RTN4-207ENST00000402434 PRSS1P07477 247 aa12.53□□□□□ -0.4
RTN4-207ENST00000402434 XGP55808 180 aa12.53□□□□□ -0.4
RTN4-207ENST00000402434 DGAT2L7PQ6IED9 249 aa12.53□□□□□ -0.4
RTN4-207ENST00000402434 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
RTN4-207ENST00000402434 LINC00959A0A1B0GUT2 108 aa12.52□□□□□ -0.41
RTN4-207ENST00000402434 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
RTN4-207ENST00000402434 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
RTN4-207ENST00000402434 APOC3P02656 99 aa12.51□□□□□ -0.41
RTN4-207ENST00000402434 RAB5AP20339 215 aa12.51□□□□□ -0.41
RTN4-207ENST00000402434 GNB1LQ9BYB4 327 aa12.51□□□□□ -0.41
RTN4-207ENST00000402434 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
RTN4-207ENST00000402434 HSPG2P98160 4391 aa12.5□□□□□ -0.41
RTN4-207ENST00000402434 RPL39P62891 51 aaKnown RBP12.5□□□□□ -0.41
RTN4-207ENST00000402434 SVBPQ8N300 66 aa12.5□□□□□ -0.41
RTN4-207ENST00000402434 LOC389332A0A1B0GUA5 103 aa12.49□□□□□ -0.41
RTN4-207ENST00000402434 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
RTN4-207ENST00000402434 FOXI1Q12951 378 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 COX19Q49B96 90 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 LINC01620Q4KN68 170 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 Q6ZSA8 131 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 Q8N8P6 123 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 FAM30AQ9NZY2 134 aa12.48□□□□□ -0.41
RTN4-207ENST00000402434 APOBP04114 4563 aaKnown RBP12.48□□□□□ -0.41
RTN4-207ENST00000402434 CCL25O15444 150 aa12.47□□□□□ -0.41
RTN4-207ENST00000402434 SNAPINO95295 136 aa12.47□□□□□ -0.41
RTN4-207ENST00000402434 SS18Q15532 418 aa12.47□□□□□ -0.41
RTN4-207ENST00000402434 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
RTN4-207ENST00000402434 XCL1P47992 114 aa12.46□□□□□ -0.41
RTN4-207ENST00000402434 KIAA1644Q3SXP7 199 aa12.46□□□□□ -0.41
RTN4-207ENST00000402434 Q6ZUT4 128 aa12.46□□□□□ -0.41
RTN4-207ENST00000402434 Q8N1X5 172 aa12.46□□□□□ -0.41
RTN4-207ENST00000402434 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
RTN4-207ENST00000402434 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.42
RTN4-207ENST00000402434 K7EMI3 77 aa12.46□□□□□ -0.42
RTN4-207ENST00000402434 MRPS36P82909 103 aaKnown RBP12.46□□□□□ -0.42
RTN4-207ENST00000402434 CFAP161Q6P656 301 aa12.46□□□□□ -0.42
RTN4-207ENST00000402434 CD164L2Q6UWJ8 174 aa12.46□□□□□ -0.42
RTN4-207ENST00000402434 NXT2Q9NPJ8 142 aaKnown RBP12.46□□□□□ -0.42
RTN4-207ENST00000402434 hDV102S1A0JD36 115 aa12.45□□□□□ -0.42
RTN4-207ENST00000402434 MT-ND6P03923 174 aa12.45□□□□□ -0.42
RTN4-207ENST00000402434 CNBPP62633 177 aaKnown RBP12.45□□□□□ -0.42
RTN4-207ENST00000402434 RNASE13Q5GAN3 156 aaKnown RBP12.45□□□□□ -0.42
RTN4-207ENST00000402434 C9orf163Q8N9P6 203 aa12.45□□□□□ -0.42
RTN4-207ENST00000402434 PYGO1Q9Y3Y4 419 aa12.44□□□□□ -0.42
RTN4-207ENST00000402434 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
RTN4-207ENST00000402434 SLPIP03973 132 aa12.42□□□□□ -0.42
RTN4-207ENST00000402434 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
RTN4-207ENST00000402434 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
RTN4-207ENST00000402434 OPRPNQ99935 248 aaPredicted RBP12.42□□□□□ -0.42
RTN4-207ENST00000402434 ALKBH7Q9BT30 221 aaPredicted RBP12.42□□□□□ -0.42
RTN4-207ENST00000402434 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
RTN4-207ENST00000402434 TGIF2-C20orf24A0A0A6YYL0 155 aa12.41□□□□□ -0.42
RTN4-207ENST00000402434 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
RTN4-207ENST00000402434 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
RTN4-207ENST00000402434 AP5S1Q9NUS5 200 aa12.41□□□□□ -0.42
RTN4-207ENST00000402434 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
RTN4-207ENST00000402434 HAMPP81172 84 aa12.4□□□□□ -0.43
RTN4-207ENST00000402434 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.43
RTN4-207ENST00000402434 IGHV1-58A0A0C4DH39 117 aa12.39□□□□□ -0.43
RTN4-207ENST00000402434 FABP9Q0Z7S8 132 aa12.39□□□□□ -0.43
RTN4-207ENST00000402434 PCLOQ9Y6V0 5065 aa12.39□□□□□ -0.43
RTN4-207ENST00000402434 IGLV4-3A0A075B6K6 122 aa12.38□□□□□ -0.43
RTN4-207ENST00000402434 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.38□□□□□ -0.43
RTN4-207ENST00000402434 HIGD2BQ4VC39 106 aa12.38□□□□□ -0.43
RTN4-207ENST00000402434 SDIM1Q6ZPB5 146 aa12.38□□□□□ -0.43
RTN4-207ENST00000402434 LINC01546A6NGU7 62 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 G0S2P27469 103 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 PRSS3P2Q8NHM4 247 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 TMEM141Q96I45 108 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 YPEL4Q96NS1 127 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
RTN4-207ENST00000402434 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
RTN4-207ENST00000402434 COX7A2LO14548 114 aa12.36□□□□□ -0.43
RTN4-207ENST00000402434 NPSP0C0P6 89 aa12.36□□□□□ -0.43
RTN4-207ENST00000402434 IFITM10A6NMD0 228 aa12.35□□□□□ -0.43
RTN4-207ENST00000402434 TRAPPC1Q9Y5R8 145 aa12.35□□□□□ -0.43
RTN4-207ENST00000402434 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
RTN4-207ENST00000402434 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
RTN4-207ENST00000402434 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
RTN4-207ENST00000402434 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
RTN4-207ENST00000402434 MALP21145 153 aa12.34□□□□□ -0.43
RTN4-207ENST00000402434 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
RTN4-207ENST00000402434 EPM2AB3EWF7 344 aa12.33□□□□□ -0.44
RTN4-207ENST00000402434 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
RTN4-207ENST00000402434 C5orf38Q86SI9 138 aa12.33□□□□□ -0.44
RTN4-207ENST00000402434 AMELXQ99217 191 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms