RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ADIRFQ15847 76 aa7.66□□□□□ -1.18
SMIM11A-201ENST00000399292 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
SMIM11A-201ENST00000399292 NUP35Q8NFH5 326 aa7.66□□□□□ -1.18
SMIM11A-201ENST00000399292 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
SMIM11A-201ENST00000399292 H7C423 109 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 APCSP02743 223 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 PRSS1P07477 247 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 RAB4AP20338 218 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 AMMECR1LQ6DCA0 310 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 CLRN3Q8NCR9 226 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 MRAP2Q96G30 205 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
SMIM11A-201ENST00000399292 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
SMIM11A-201ENST00000399292 RNASEKQ6P5S7 137 aaKnown RBP7.64□□□□□ -1.19
SMIM11A-201ENST00000399292 AMN1Q8IY45 258 aa7.64□□□□□ -1.19
SMIM11A-201ENST00000399292 RNF185Q96GF1 192 aa7.64□□□□□ -1.19
SMIM11A-201ENST00000399292 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
SMIM11A-201ENST00000399292 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
SMIM11A-201ENST00000399292 FGF6P10767 208 aa7.63□□□□□ -1.19
SMIM11A-201ENST00000399292 CHAC1Q9BUX1 264 aa7.63□□□□□ -1.19
SMIM11A-201ENST00000399292 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 SMIM27A0A1W2PRY6 76 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 PPP1R17O96001 155 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 POLR2KP53803 58 aaKnown RBP7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 SCXQ7RTU7 201 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 BTF3L4Q96K17 158 aa7.62□□□□□ -1.19
SMIM11A-201ENST00000399292 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 hDV102S1A0JD36 115 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 VCYO14598 125 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 TSHBP01222 138 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 ESDP10768 282 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 ZNF25P17030 456 aaPredicted RBP7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 RPS10P46783 165 aaKnown RBP7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 CAMPP49913 170 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 CIRBP-AS1Q8TBR5 109 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
SMIM11A-201ENST00000399292 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 A0A1B0GW15 77 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 GAGE12HA6NDE8 117 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 SMKR1H3BMG3 65 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 CLLU1Q5K131 121 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 CFAP161Q6P656 301 aa7.6□□□□□ -1.19
SMIM11A-201ENST00000399292 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 FCER1GP30273 86 aa7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 CNBPP62633 177 aaKnown RBP7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 MRPL51Q4U2R6 128 aaKnown RBP7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 NRACQ8N912 160 aa7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
SMIM11A-201ENST00000399292 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 C7orf77A4D0Y5 90 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 S100A8P05109 93 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 SUMO2P61956 95 aaKnown RBP7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 SDIM1Q6ZPB5 146 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
SMIM11A-201ENST00000399292 F8W036 122 aa7.57□□□□□ -1.2
SMIM11A-201ENST00000399292 CKS2P33552 79 aa7.57□□□□□ -1.2
SMIM11A-201ENST00000399292 SMAGPQ0VAQ4 97 aa7.57□□□□□ -1.2
SMIM11A-201ENST00000399292 MRPL52Q86TS9 123 aaKnown RBP7.57□□□□□ -1.2
SMIM11A-201ENST00000399292 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
SMIM11A-201ENST00000399292 TRBV24-1A0A075B6N3 115 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 LINC00959A0A1B0GUT2 108 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 HBBP68871 147 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 SS18Q15532 418 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 UQCC3Q6UW78 93 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 ZNF664Q8N3J9 261 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 C15orf56Q8N910 161 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 C20orf78Q9BR46 151 aa7.56□□□□□ -1.2
SMIM11A-201ENST00000399292 CCL25O15444 150 aa7.55□□□□□ -1.2
SMIM11A-201ENST00000399292 XCL1P47992 114 aa7.55□□□□□ -1.2
SMIM11A-201ENST00000399292 FOXI1Q12951 378 aa7.55□□□□□ -1.2
SMIM11A-201ENST00000399292 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 TCAPO15273 167 aa7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 RPL32P62910 135 aaKnown RBP7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 PNRC1Q12796 327 aaPredicted RBP7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 TMEM18Q96B42 140 aa7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
SMIM11A-201ENST00000399292 D6R8Y8 96 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 PPBPP02775 128 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 IFITM2Q01629 132 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 CD164L2Q6UWJ8 174 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
SMIM11A-201ENST00000399292 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
SMIM11A-201ENST00000399292 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
SMIM11A-201ENST00000399292 PANO1I0J062 215 aa7.52□□□□□ -1.21
SMIM11A-201ENST00000399292 PHOX2AO14813 284 aa7.52□□□□□ -1.21
SMIM11A-201ENST00000399292 IGHV1-58A0A0C4DH39 117 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms