RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 LRP1Q07954 4544 aaKnown RBP13.71□□□□□ -0.22
RUNX1-204ENST00000399237 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
RUNX1-204ENST00000399237 FOXI1Q12951 378 aa13.7□□□□□ -0.22
RUNX1-204ENST00000399237 MRPL52Q86TS9 123 aaKnown RBP13.7□□□□□ -0.22
RUNX1-204ENST00000399237 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
RUNX1-204ENST00000399237 CDC42SE2Q9NRR3 84 aa13.69□□□□□ -0.22
RUNX1-204ENST00000399237 FAT3Q8TDW7 4589 aa13.69□□□□□ -0.22
RUNX1-204ENST00000399237 LINC00959A0A1B0GUT2 108 aa13.68□□□□□ -0.22
RUNX1-204ENST00000399237 C7orf77A4D0Y5 90 aa13.68□□□□□ -0.22
RUNX1-204ENST00000399237 KRTAP29-1A8MX34 341 aaPredicted RBP13.68□□□□□ -0.22
RUNX1-204ENST00000399237 VCYO14598 125 aa13.67□□□□□ -0.22
RUNX1-204ENST00000399237 CIRBPQ14011 172 aaKnown RBP13.67□□□□□ -0.22
RUNX1-204ENST00000399237 CCL25O15444 150 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 CHTF8P0CG12 524 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 XCL1P47992 114 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 BTF3L4Q96K17 158 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 UBE2D4Q9Y2X8 147 aa13.66□□□□□ -0.22
RUNX1-204ENST00000399237 A0A1B0GW15 77 aa13.65□□□□□ -0.22
RUNX1-204ENST00000399237 HBBP68871 147 aa13.65□□□□□ -0.22
RUNX1-204ENST00000399237 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
RUNX1-204ENST00000399237 GVQW2A0A096LPI5 108 aaPredicted RBP13.64□□□□□ -0.23
RUNX1-204ENST00000399237 D6R8Y8 96 aa13.64□□□□□ -0.23
RUNX1-204ENST00000399237 FCER1GP30273 86 aa13.64□□□□□ -0.23
RUNX1-204ENST00000399237 RNASE13Q5GAN3 156 aaKnown RBP13.64□□□□□ -0.23
RUNX1-204ENST00000399237 ZNF664Q8N3J9 261 aa13.64□□□□□ -0.23
RUNX1-204ENST00000399237 LINC00862A6NCI5 91 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 TNFRSF6BO95407 300 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 NPYP01303 97 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 CKS2P33552 79 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 FAM104AQ969W3 186 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 AP5S1Q9NUS5 200 aa13.63□□□□□ -0.23
RUNX1-204ENST00000399237 IGHV3-64A0A075B6Q5 118 aa13.62□□□□□ -0.23
RUNX1-204ENST00000399237 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
RUNX1-204ENST00000399237 PPP1R17O96001 155 aa13.62□□□□□ -0.23
RUNX1-204ENST00000399237 LINC00526Q96FQ7 95 aa13.62□□□□□ -0.23
RUNX1-204ENST00000399237 C20orf78Q9BR46 151 aa13.62□□□□□ -0.23
RUNX1-204ENST00000399237 HNRNPA3P51991 378 aaKnown RBP13.61□□□□□ -0.23
RUNX1-204ENST00000399237 RPL32P62910 135 aaKnown RBP13.61□□□□□ -0.23
RUNX1-204ENST00000399237 IFITM2Q01629 132 aa13.61□□□□□ -0.23
RUNX1-204ENST00000399237 Q6ZUT4 128 aa13.61□□□□□ -0.23
RUNX1-204ENST00000399237 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
RUNX1-204ENST00000399237 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.6□□□□□ -0.23
RUNX1-204ENST00000399237 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
RUNX1-204ENST00000399237 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
RUNX1-204ENST00000399237 SPACA4Q8TDM5 124 aa13.6□□□□□ -0.23
RUNX1-204ENST00000399237 SMIM2Q9BVW6 85 aa13.6□□□□□ -0.23
RUNX1-204ENST00000399237 CLLU1Q5K131 121 aa13.59□□□□□ -0.23
RUNX1-204ENST00000399237 PRSS3P2Q8NHM4 247 aa13.59□□□□□ -0.23
RUNX1-204ENST00000399237 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
RUNX1-204ENST00000399237 HMCN2Q8NDA2 5059 aa13.59□□□□□ -0.23
RUNX1-204ENST00000399237 COX6A2Q02221 97 aa13.58□□□□□ -0.24
RUNX1-204ENST00000399237 A0A087WYN8 130 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 S100A8P05109 93 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 ADCYAP1P18509 176 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 RAB14P61106 215 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 SS18Q15532 418 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 CD164L2Q6UWJ8 174 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 ATP5L2Q7Z4Y8 100 aa13.57□□□□□ -0.24
RUNX1-204ENST00000399237 F8W036 122 aa13.56□□□□□ -0.24
RUNX1-204ENST00000399237 TCAPO15273 167 aa13.56□□□□□ -0.24
RUNX1-204ENST00000399237 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
RUNX1-204ENST00000399237 PNRC1Q12796 327 aaPredicted RBP13.56□□□□□ -0.24
RUNX1-204ENST00000399237 TIMM21Q9BVV7 248 aa13.56□□□□□ -0.24
RUNX1-204ENST00000399237 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
RUNX1-204ENST00000399237 OPRPNQ99935 248 aaPredicted RBP13.55□□□□□ -0.24
RUNX1-204ENST00000399237 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
RUNX1-204ENST00000399237 PHOX2AO14813 284 aa13.53□□□□□ -0.24
RUNX1-204ENST00000399237 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
RUNX1-204ENST00000399237 A0A096LNI7 61 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 OXTP01178 125 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 PPBPP02775 128 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 TMEM136Q6ZRR5 245 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 ORMDL3Q8N138 153 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 PLAC8Q9NZF1 115 aa13.52□□□□□ -0.25
RUNX1-204ENST00000399237 IGKV2-24A0A0C4DH68 120 aa13.51□□□□□ -0.25
RUNX1-204ENST00000399237 C1orf196B1AJZ1 125 aa13.51□□□□□ -0.25
RUNX1-204ENST00000399237 MT-ND4LP03901 98 aa13.51□□□□□ -0.25
RUNX1-204ENST00000399237 SERTAD4-AS1Q5TG53 156 aa13.5□□□□□ -0.25
RUNX1-204ENST00000399237 C5orf38Q86SI9 138 aa13.49□□□□□ -0.25
RUNX1-204ENST00000399237 TMEM18Q96B42 140 aa13.49□□□□□ -0.25
RUNX1-204ENST00000399237 CARD19Q96LW7 228 aa13.49□□□□□ -0.25
RUNX1-204ENST00000399237 IGLV4-69A0A075B6H9 119 aa13.48□□□□□ -0.25
RUNX1-204ENST00000399237 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
RUNX1-204ENST00000399237 COX7A2LO14548 114 aa13.48□□□□□ -0.25
RUNX1-204ENST00000399237 MAJINQ3KP22 176 aa13.48□□□□□ -0.25
RUNX1-204ENST00000399237 SMAGPQ0VAQ4 97 aa13.47□□□□□ -0.25
RUNX1-204ENST00000399237 DPH3Q96FX2 82 aa13.47□□□□□ -0.25
RUNX1-204ENST00000399237 SPANXA1Q9NS26 97 aa13.47□□□□□ -0.25
RUNX1-204ENST00000399237 LOC389332A0A1B0GUA5 103 aa13.46□□□□□ -0.25
RUNX1-204ENST00000399237 MRPS36P82909 103 aaKnown RBP13.46□□□□□ -0.25
RUNX1-204ENST00000399237 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
RUNX1-204ENST00000399237 Q6ZRU5 148 aa13.46□□□□□ -0.25
RUNX1-204ENST00000399237 TMEM218A2RU14 115 aa13.45□□□□□ -0.26
RUNX1-204ENST00000399237 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
RUNX1-204ENST00000399237 MALP21145 153 aa13.44□□□□□ -0.26
RUNX1-204ENST00000399237 STPG4Q8N801 248 aa13.44□□□□□ -0.26
RUNX1-204ENST00000399237 IGLV4-3A0A075B6K6 122 aa13.43□□□□□ -0.26
RUNX1-204ENST00000399237 IGHV3OR16-9A0A0B4J2B5 98 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms