RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 TRAPPC1Q9Y5R8 145 aa6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 PKD1P98161 4303 aa6.94□□□□□ -1.3
CYCSP55-201ENST00000399027 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 RAB5AP20339 215 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 FABP9Q0Z7S8 132 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 KRTAP26-1Q6PEX3 210 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 TMEM101Q96IK0 257 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 C1orf43Q9BWL3 253 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
CYCSP55-201ENST00000399027 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
CYCSP55-201ENST00000399027 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
CYCSP55-201ENST00000399027 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
CYCSP55-201ENST00000399027 OR5A1Q8NGJ0 315 aa6.92□□□□□ -1.3
CYCSP55-201ENST00000399027 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
CYCSP55-201ENST00000399027 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.3
CYCSP55-201ENST00000399027 MRPS36P82909 103 aaKnown RBP6.9□□□□□ -1.3
CYCSP55-201ENST00000399027 DGAT2L7PQ6IED9 249 aa6.9□□□□□ -1.3
CYCSP55-201ENST00000399027 Q8N814 137 aa6.9□□□□□ -1.3
CYCSP55-201ENST00000399027 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 COLCA2A8K830 154 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 G0S2P27469 103 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 WFDC2Q14508 124 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 Q6ZUT4 128 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 CYSLTR1Q9Y271 337 aa6.89□□□□□ -1.31
CYCSP55-201ENST00000399027 CCL25O15444 150 aa6.88□□□□□ -1.31
CYCSP55-201ENST00000399027 NPSP0C0P6 89 aa6.88□□□□□ -1.31
CYCSP55-201ENST00000399027 C2orf66Q6UXQ4 117 aa6.88□□□□□ -1.31
CYCSP55-201ENST00000399027 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
CYCSP55-201ENST00000399027 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
CYCSP55-201ENST00000399027 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
CYCSP55-201ENST00000399027 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
CYCSP55-201ENST00000399027 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
CYCSP55-201ENST00000399027 IGLV4-3A0A075B6K6 122 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 LECT2O14960 151 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 FOXI1Q12951 378 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 SS18Q15532 418 aa6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
CYCSP55-201ENST00000399027 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 C1orf196B1AJZ1 125 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 SCO1O75880 301 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 TRGC2P03986 189 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 LINC00614P0C842 121 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 C14orf177Q52M58 125 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 FA2HQ7L5A8 372 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 TMEM141Q96I45 108 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
CYCSP55-201ENST00000399027 C16orf90A8MZG2 172 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 S100A1P23297 94 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 RAB5BP61020 215 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 LINC00173Q6ZV60 143 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 ERASQ7Z444 233 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 AMELXQ99217 191 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
CYCSP55-201ENST00000399027 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.32
CYCSP55-201ENST00000399027 A0A096LNJ9 63 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 IGLV5-52A0A0A0MRZ9 124 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 TRAV13-1A0A0B4J241 112 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 XCL1P47992 114 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 TEX43Q6ZNM6 134 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
CYCSP55-201ENST00000399027 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 ATP6V1G1O75348 118 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 PRSS1P07477 247 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 Q6ZN92 141 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
CYCSP55-201ENST00000399027 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
CYCSP55-201ENST00000399027 HBDP02042 147 aa6.81□□□□□ -1.32
CYCSP55-201ENST00000399027 UBE2D1P51668 147 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms