RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TGIF2-C20orf24A0A0A6YYL0 155 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 PRSS47A8MTI9 375 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 KRTAP26-1Q6PEX3 210 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 TMEM18Q96B42 140 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 RAB5AP20339 215 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 UBE2D4Q9Y2X8 147 aa13.98□□□□□ -0.17
TSPAN4-206ENST00000397408 DNAH5Q8TE73 4624 aa13.97□□□□□ -0.17
TSPAN4-206ENST00000397408 MT-ND6P03923 174 aa13.97□□□□□ -0.17
TSPAN4-206ENST00000397408 SMAGPQ0VAQ4 97 aa13.97□□□□□ -0.17
TSPAN4-206ENST00000397408 DGAT2L7PQ6IED9 249 aa13.97□□□□□ -0.17
TSPAN4-206ENST00000397408 RPL39P62891 51 aaKnown RBP13.96□□□□□ -0.18
TSPAN4-206ENST00000397408 NTN5Q8WTR8 489 aaPredicted RBP13.96□□□□□ -0.18
TSPAN4-206ENST00000397408 MRPL18Q9H0U6 180 aaKnown RBP13.96□□□□□ -0.18
TSPAN4-206ENST00000397408 CDC42SE2Q9NRR3 84 aa13.96□□□□□ -0.18
TSPAN4-206ENST00000397408 IGLV5-52A0A0A0MRZ9 124 aa13.95□□□□□ -0.18
TSPAN4-206ENST00000397408 Q8N8P6 123 aa13.95□□□□□ -0.18
TSPAN4-206ENST00000397408 CSDC2Q9Y534 153 aaKnown RBP13.95□□□□□ -0.18
TSPAN4-206ENST00000397408 LRP1BQ9NZR2 4599 aa13.95□□□□□ -0.18
TSPAN4-206ENST00000397408 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-206ENST00000397408 ZNF664Q8N3J9 261 aa13.94□□□□□ -0.18
TSPAN4-206ENST00000397408 TIMM21Q9BVV7 248 aa13.94□□□□□ -0.18
TSPAN4-206ENST00000397408 USP17L23D6RBM5 183 aa13.93□□□□□ -0.18
TSPAN4-206ENST00000397408 FABP9Q0Z7S8 132 aa13.93□□□□□ -0.18
TSPAN4-206ENST00000397408 Q6ZUT4 128 aa13.92□□□□□ -0.18
TSPAN4-206ENST00000397408 CHCHD10Q8WYQ3 142 aaPredicted RBP13.92□□□□□ -0.18
TSPAN4-206ENST00000397408 NXT2Q9NPJ8 142 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-206ENST00000397408 KIAA1109Q2LD37 5005 aa13.92□□□□□ -0.18
TSPAN4-206ENST00000397408 GAGE12HA6NDE8 117 aa13.91□□□□□ -0.18
TSPAN4-206ENST00000397408 C14orf177Q52M58 125 aa13.91□□□□□ -0.18
TSPAN4-206ENST00000397408 RNASE13Q5GAN3 156 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-206ENST00000397408 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-206ENST00000397408 SPANXA1Q9NS26 97 aa13.91□□□□□ -0.18
TSPAN4-206ENST00000397408 LINC00959A0A1B0GUT2 108 aa13.9□□□□□ -0.18
TSPAN4-206ENST00000397408 IFI27P40305 119 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-206ENST00000397408 CBLN2Q8IUK8 224 aa13.9□□□□□ -0.19
TSPAN4-206ENST00000397408 YPEL4Q96NS1 127 aa13.9□□□□□ -0.19
TSPAN4-206ENST00000397408 TRAPPC1Q9Y5R8 145 aa13.9□□□□□ -0.19
TSPAN4-206ENST00000397408 GCSHP23434 173 aa13.89□□□□□ -0.19
TSPAN4-206ENST00000397408 ORMDL2Q53FV1 153 aa13.89□□□□□ -0.19
TSPAN4-206ENST00000397408 K7EMI3 77 aa13.88□□□□□ -0.19
TSPAN4-206ENST00000397408 CCL25O15444 150 aa13.88□□□□□ -0.19
TSPAN4-206ENST00000397408 XCL1P47992 114 aa13.88□□□□□ -0.19
TSPAN4-206ENST00000397408 SS18Q15532 418 aa13.88□□□□□ -0.19
TSPAN4-206ENST00000397408 KRTAP10-1P60331 282 aa13.87□□□□□ -0.19
TSPAN4-206ENST00000397408 SMCO4Q9NRQ5 59 aa13.87□□□□□ -0.19
TSPAN4-206ENST00000397408 C2orf66Q6UXQ4 117 aa13.86□□□□□ -0.19
TSPAN4-206ENST00000397408 PRSS3P2Q8NHM4 247 aa13.86□□□□□ -0.19
TSPAN4-206ENST00000397408 FAM104AQ969W3 186 aa13.86□□□□□ -0.19
TSPAN4-206ENST00000397408 OPRPNQ99935 248 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-206ENST00000397408 CYSLTR1Q9Y271 337 aa13.86□□□□□ -0.19
TSPAN4-206ENST00000397408 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
TSPAN4-206ENST00000397408 PRSS1P07477 247 aa13.85□□□□□ -0.19
TSPAN4-206ENST00000397408 MRPS36P82909 103 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-206ENST00000397408 FOXI1Q12951 378 aa13.85□□□□□ -0.19
TSPAN4-206ENST00000397408 PYGO1Q9Y3Y4 419 aa13.84□□□□□ -0.19
TSPAN4-206ENST00000397408 C1orf196B1AJZ1 125 aa13.82□□□□□ -0.2
TSPAN4-206ENST00000397408 CDK2AP2O75956 126 aa13.82□□□□□ -0.2
TSPAN4-206ENST00000397408 RYR1P21817 5038 aa13.82□□□□□ -0.2
TSPAN4-206ENST00000397408 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 hDV102S1A0JD36 115 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 CD164L2Q6UWJ8 174 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 C15orf56Q8N910 161 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 HERC2O95714 4834 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 IFITM10A6NMD0 228 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 LINC01620Q4KN68 170 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 CFAP161Q6P656 301 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 FA2HQ7L5A8 372 aa13.81□□□□□ -0.2
TSPAN4-206ENST00000397408 APOBP04114 4563 aaKnown RBP13.8□□□□□ -0.2
TSPAN4-206ENST00000397408 TMEM141Q96I45 108 aa13.8□□□□□ -0.2
TSPAN4-206ENST00000397408 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
TSPAN4-206ENST00000397408 G0S2P27469 103 aa13.79□□□□□ -0.2
TSPAN4-206ENST00000397408 C18orf32Q8TCD1 76 aa13.79□□□□□ -0.2
TSPAN4-206ENST00000397408 HIGD2BQ4VC39 106 aa13.78□□□□□ -0.2
TSPAN4-206ENST00000397408 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
TSPAN4-206ENST00000397408 Q6ZN92 141 aa13.77□□□□□ -0.21
TSPAN4-206ENST00000397408 TOMM6Q96B49 74 aa13.77□□□□□ -0.21
TSPAN4-206ENST00000397408 AP5S1Q9NUS5 200 aa13.77□□□□□ -0.21
TSPAN4-206ENST00000397408 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
TSPAN4-206ENST00000397408 HSPG2P98160 4391 aa13.75□□□□□ -0.21
TSPAN4-206ENST00000397408 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
TSPAN4-206ENST00000397408 COX7A2LO14548 114 aa13.75□□□□□ -0.21
TSPAN4-206ENST00000397408 GVQW2A0A096LPI5 108 aaPredicted RBP13.74□□□□□ -0.21
TSPAN4-206ENST00000397408 NPSP0C0P6 89 aa13.74□□□□□ -0.21
TSPAN4-206ENST00000397408 CNBPP62633 177 aaKnown RBP13.74□□□□□ -0.21
TSPAN4-206ENST00000397408 TIMM17AQ99595 171 aa13.74□□□□□ -0.21
TSPAN4-206ENST00000397408 C2orf88Q9BSF0 95 aa13.74□□□□□ -0.21
TSPAN4-206ENST00000397408 MALP21145 153 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 ZC2HC1BQ5TFG8 222 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 C5orf38Q86SI9 138 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 VCX2Q9H322 139 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 URB1-AS1Q96HZ7 61 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 SCGB3A1Q96QR1 104 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 FAM30AQ9NZY2 134 aa13.73□□□□□ -0.21
TSPAN4-206ENST00000397408 SLPIP03973 132 aa13.72□□□□□ -0.21
TSPAN4-206ENST00000397408 XGP55808 180 aa13.72□□□□□ -0.21
TSPAN4-206ENST00000397408 ERASQ7Z444 233 aa13.72□□□□□ -0.21
TSPAN4-206ENST00000397408 C9orf163Q8N9P6 203 aa13.72□□□□□ -0.21
TSPAN4-206ENST00000397408 AMELXQ99217 191 aa13.72□□□□□ -0.21
TSPAN4-206ENST00000397408 LINC01549A6NIU2 74 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms