RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 A0A096LPF7 62 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 H7C423 109 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
TRIM39-204ENST00000396548 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
TRIM39-204ENST00000396548 TRAV9-2A0A087WT02 112 aa8.8□□□□□ -1
TRIM39-204ENST00000396548 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
TRIM39-204ENST00000396548 TMEM97Q5BJF2 176 aa8.8□□□□□ -1
TRIM39-204ENST00000396548 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
TRIM39-204ENST00000396548 PMVKQ15126 192 aa8.8□□□□□ -1
TRIM39-204ENST00000396548 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 HTN3P15516 51 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 TMEM243Q9BU79 118 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 F8VRH5 84 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 VAMP8Q9BV40 100 aa8.79□□□□□ -1
TRIM39-204ENST00000396548 hDV102S1A0JD36 115 aa8.78□□□□□ -1
TRIM39-204ENST00000396548 M0R143 59 aa8.78□□□□□ -1
TRIM39-204ENST00000396548 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
TRIM39-204ENST00000396548 FGF6P10767 208 aa8.78□□□□□ -1
TRIM39-204ENST00000396548 BATFQ16520 125 aa8.78□□□□□ -1
TRIM39-204ENST00000396548 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
TRIM39-204ENST00000396548 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
TRIM39-204ENST00000396548 DLEU1O43261 78 aa8.77□□□□□ -1
TRIM39-204ENST00000396548 IGKCP01834 107 aa8.77□□□□□ -1
TRIM39-204ENST00000396548 Q6ZUT4 128 aa8.77□□□□□ -1
TRIM39-204ENST00000396548 PAM16Q9Y3D7 125 aa8.77□□□□□ -1
TRIM39-204ENST00000396548 DPM2O94777 84 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 PLNP26678 52 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 SPATA45Q537H7 98 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 CDC42SE2Q9NRR3 84 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1.01
TRIM39-204ENST00000396548 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
TRIM39-204ENST00000396548 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
TRIM39-204ENST00000396548 TIRAPP58753 221 aa8.76□□□□□ -1.01
TRIM39-204ENST00000396548 NFE4Q86UQ8 179 aa8.76□□□□□ -1.01
TRIM39-204ENST00000396548 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
TRIM39-204ENST00000396548 NHLRC4P0CG21 123 aaPredicted RBP8.75□□□□□ -1.01
TRIM39-204ENST00000396548 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
TRIM39-204ENST00000396548 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
TRIM39-204ENST00000396548 VCX2Q9H322 139 aa8.75□□□□□ -1.01
TRIM39-204ENST00000396548 STPG4Q8N801 248 aa8.75□□□□□ -1.01
TRIM39-204ENST00000396548 TRAV10A0A0B4J240 114 aa8.74□□□□□ -1.01
TRIM39-204ENST00000396548 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
TRIM39-204ENST00000396548 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
TRIM39-204ENST00000396548 A0A1B0GUV1 79 aa8.74□□□□□ -1.01
TRIM39-204ENST00000396548 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 UBE2D1P51668 147 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 GAGE6Q13070 117 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 LYSTQ99698 3801 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 LELP1Q5T871 98 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 UBE2L6O14933 153 aa8.73□□□□□ -1.01
TRIM39-204ENST00000396548 SMAGPQ0VAQ4 97 aa8.72□□□□□ -1.01
TRIM39-204ENST00000396548 A0A0J9YXV3 536 aa8.72□□□□□ -1.01
TRIM39-204ENST00000396548 OR5A1Q8NGJ0 315 aa8.72□□□□□ -1.01
TRIM39-204ENST00000396548 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
TRIM39-204ENST00000396548 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
TRIM39-204ENST00000396548 IGKV2D-26A0A0A0MRZ7 120 aa8.71□□□□□ -1.02
TRIM39-204ENST00000396548 TINCRA0A1B0GVN0 87 aa8.71□□□□□ -1.02
TRIM39-204ENST00000396548 MPV17L2Q567V2 206 aa8.71□□□□□ -1.02
TRIM39-204ENST00000396548 STARD9Q9P2P6 4700 aa8.71□□□□□ -1.02
TRIM39-204ENST00000396548 IGLV5-45A0A087WSX0 123 aa8.7□□□□□ -1.02
TRIM39-204ENST00000396548 RBX1P62877 108 aa8.7□□□□□ -1.02
TRIM39-204ENST00000396548 TMEM101Q96IK0 257 aa8.7□□□□□ -1.02
TRIM39-204ENST00000396548 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
TRIM39-204ENST00000396548 ESRGQ1W209 222 aa8.7□□□□□ -1.02
TRIM39-204ENST00000396548 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 AMMECR1LQ6DCA0 310 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 Q8N3U1 123 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 CHAC1Q9BUX1 264 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 LINC00242Q5T6M2 205 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 COX8AP10176 69 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 COX6A2Q02221 97 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
TRIM39-204ENST00000396548 TMEM223A0PJW6 202 aa8.68□□□□□ -1.02
TRIM39-204ENST00000396548 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
TRIM39-204ENST00000396548 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
TRIM39-204ENST00000396548 E9PLD3 99 aa8.67□□□□□ -1.02
TRIM39-204ENST00000396548 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
TRIM39-204ENST00000396548 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
TRIM39-204ENST00000396548 UQCR10Q9UDW1 63 aa8.67□□□□□ -1.02
TRIM39-204ENST00000396548 TCTAP57738 103 aa8.66□□□□□ -1.02
TRIM39-204ENST00000396548 PCP2Q8IVA1 136 aa8.66□□□□□ -1.02
TRIM39-204ENST00000396548 FBN3Q75N90 2809 aa8.66□□□□□ -1.02
TRIM39-204ENST00000396548 TMEM262E9PQX1 116 aa8.65□□□□□ -1.02
TRIM39-204ENST00000396548 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.03
TRIM39-204ENST00000396548 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.03
TRIM39-204ENST00000396548 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 TSPEAR-AS2P59090 65 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 MAPKAPK5-AS1Q8N8E1 139 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 HERVK_113P63121 156 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 TTTY13Q9BZ97 58 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
TRIM39-204ENST00000396548 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
TRIM39-204ENST00000396548 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms