RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 PMVKQ15126 192 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 TRBV10-1A0A0K0K1A3 114 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 A0A1B0GV90 55 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 SIVA1O15304 175 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 ZNF479Q96JC4 524 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 NMUP48645 174 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 EMP1P54849 157 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 BATFQ16520 125 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 CST9LQ9H4G1 147 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 PYGO1Q9Y3Y4 419 aa12.22□□□□□ -0.45
TNFSF13-205ENST00000396545 DNAH2Q9P225 4427 aa12.21□□□□□ -0.45
TNFSF13-205ENST00000396545 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.46
TNFSF13-205ENST00000396545 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.46
TNFSF13-205ENST00000396545 C12orf74Q32Q52 190 aa12.21□□□□□ -0.46
TNFSF13-205ENST00000396545 COL5A1-AS1Q5SY13 56 aa12.21□□□□□ -0.46
TNFSF13-205ENST00000396545 PCP2Q8IVA1 136 aa12.21□□□□□ -0.46
TNFSF13-205ENST00000396545 NPSP0C0P6 89 aa12.2□□□□□ -0.46
TNFSF13-205ENST00000396545 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
TNFSF13-205ENST00000396545 CHCHD7Q9BUK0 85 aa12.2□□□□□ -0.46
TNFSF13-205ENST00000396545 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
TNFSF13-205ENST00000396545 K7EQD1 137 aa12.19□□□□□ -0.46
TNFSF13-205ENST00000396545 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 DEFB131BA0A096LNP1 70 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 SPART-AS1P0CW21 52 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 MPV17L2Q567V2 206 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 DNAH17Q9UFH2 4485 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 BVES-AS1Q5T3Y7 98 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 LINC00336Q6ZUF6 198 aa12.18□□□□□ -0.46
TNFSF13-205ENST00000396545 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
TNFSF13-205ENST00000396545 CRYBA4P53673 196 aa12.17□□□□□ -0.46
TNFSF13-205ENST00000396545 COTL1Q14019 142 aa12.17□□□□□ -0.46
TNFSF13-205ENST00000396545 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 E9PLD3 99 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 DEFB130BP0DP73 79 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 DEFB130AP0DP74 79 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 NFE4Q86UQ8 179 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
TNFSF13-205ENST00000396545 TMEM97Q5BJF2 176 aa12.15□□□□□ -0.46
TNFSF13-205ENST00000396545 AMELXQ99217 191 aa12.15□□□□□ -0.46
TNFSF13-205ENST00000396545 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
TNFSF13-205ENST00000396545 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
TNFSF13-205ENST00000396545 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 UBE2D3P61077 147 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 DAD1P61803 113 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 UBE2D2P62837 147 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 FHL2Q14192 279 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 TTTY13Q9BZ97 58 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
TNFSF13-205ENST00000396545 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 HSD52Q0P140 79 aa12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 VCX2Q9H322 139 aa12.13□□□□□ -0.47
TNFSF13-205ENST00000396545 ATP5G1P05496 136 aa12.12□□□□□ -0.47
TNFSF13-205ENST00000396545 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
TNFSF13-205ENST00000396545 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
TNFSF13-205ENST00000396545 PKD1P98161 4303 aa12.11□□□□□ -0.47
TNFSF13-205ENST00000396545 RYR1P21817 5038 aa12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 RTL8CO15255 209 aa12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 HERVK_113P61574 105 aa12.1□□□□□ -0.47
TNFSF13-205ENST00000396545 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 GAGE1Q13065 139 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 GAGE4Q13068 117 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 GAGE5Q13069 117 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 GTSF1LQ9H1H1 148 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 MYMXA0A1B0GTQ4 84 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 LINC00694P0DN24 101 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 SEC11AP67812 179 aa12.09□□□□□ -0.47
TNFSF13-205ENST00000396545 M0R2N4 97 aa12.08□□□□□ -0.48
TNFSF13-205ENST00000396545 DNAH11Q96DT5 4516 aa12.08□□□□□ -0.48
TNFSF13-205ENST00000396545 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
TNFSF13-205ENST00000396545 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
TNFSF13-205ENST00000396545 Q6ZUT4 128 aa12.07□□□□□ -0.48
TNFSF13-205ENST00000396545 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
TNFSF13-205ENST00000396545 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
TNFSF13-205ENST00000396545 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
TNFSF13-205ENST00000396545 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms