RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 FUSP35637 526 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNFSF13-204ENST00000396542 COX19Q49B96 90 aa11.71□□□□□ -0.53
TNFSF13-204ENST00000396542 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
TNFSF13-204ENST00000396542 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
TNFSF13-204ENST00000396542 CSDC2Q9Y534 153 aaKnown RBP11.71□□□□□ -0.53
TNFSF13-204ENST00000396542 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
TNFSF13-204ENST00000396542 MAP1LC3AQ9H492 121 aa11.7□□□□□ -0.54
TNFSF13-204ENST00000396542 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
TNFSF13-204ENST00000396542 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
TNFSF13-204ENST00000396542 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
TNFSF13-204ENST00000396542 SMAGPQ0VAQ4 97 aa11.68□□□□□ -0.54
TNFSF13-204ENST00000396542 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
TNFSF13-204ENST00000396542 HERC2O95714 4834 aa11.68□□□□□ -0.54
TNFSF13-204ENST00000396542 LOC389332A0A1B0GUA5 103 aa11.67□□□□□ -0.54
TNFSF13-204ENST00000396542 MT-ND6P03923 174 aa11.67□□□□□ -0.54
TNFSF13-204ENST00000396542 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
TNFSF13-204ENST00000396542 Q8N8P6 123 aa11.67□□□□□ -0.54
TNFSF13-204ENST00000396542 RYR1P21817 5038 aa11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 APOBP04114 4563 aaKnown RBP11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 IGLV5-52A0A0A0MRZ9 124 aa11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 RAB5AP20339 215 aa11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 RPL39P62891 51 aaKnown RBP11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
TNFSF13-204ENST00000396542 TGIF2-C20orf24A0A0A6YYL0 155 aa11.65□□□□□ -0.54
TNFSF13-204ENST00000396542 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
TNFSF13-204ENST00000396542 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
TNFSF13-204ENST00000396542 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
TNFSF13-204ENST00000396542 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
TNFSF13-204ENST00000396542 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 K7EMI3 77 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 CDK2AP2O75956 126 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 GCSHP23434 173 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 YPEL4Q96NS1 127 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 MRPL18Q9H0U6 180 aaKnown RBP11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 SMCO4Q9NRQ5 59 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
TNFSF13-204ENST00000396542 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.63□□□□□ -0.55
TNFSF13-204ENST00000396542 KRTAP10-1P60331 282 aa11.63□□□□□ -0.55
TNFSF13-204ENST00000396542 Q6ZUT4 128 aa11.63□□□□□ -0.55
TNFSF13-204ENST00000396542 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
TNFSF13-204ENST00000396542 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
TNFSF13-204ENST00000396542 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
TNFSF13-204ENST00000396542 FABP9Q0Z7S8 132 aa11.61□□□□□ -0.55
TNFSF13-204ENST00000396542 ORMDL2Q53FV1 153 aa11.61□□□□□ -0.55
TNFSF13-204ENST00000396542 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
TNFSF13-204ENST00000396542 PRSS1P07477 247 aa11.6□□□□□ -0.55
TNFSF13-204ENST00000396542 FOXI1Q12951 378 aa11.6□□□□□ -0.55
TNFSF13-204ENST00000396542 SS18Q15532 418 aa11.6□□□□□ -0.55
TNFSF13-204ENST00000396542 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
TNFSF13-204ENST00000396542 HSPG2P98160 4391 aa11.6□□□□□ -0.55
TNFSF13-204ENST00000396542 CCL25O15444 150 aa11.59□□□□□ -0.55
TNFSF13-204ENST00000396542 TRAPPC1Q9Y5R8 145 aa11.59□□□□□ -0.55
TNFSF13-204ENST00000396542 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 XCL1P47992 114 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 CYSLTR1Q9Y271 337 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 DNAH8Q96JB1 4490 aa11.58□□□□□ -0.56
TNFSF13-204ENST00000396542 C1orf196B1AJZ1 125 aa11.57□□□□□ -0.56
TNFSF13-204ENST00000396542 CD164L2Q6UWJ8 174 aa11.57□□□□□ -0.56
TNFSF13-204ENST00000396542 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
TNFSF13-204ENST00000396542 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
TNFSF13-204ENST00000396542 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
TNFSF13-204ENST00000396542 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
TNFSF13-204ENST00000396542 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
TNFSF13-204ENST00000396542 COLCA2A8K830 154 aa11.54□□□□□ -0.56
TNFSF13-204ENST00000396542 NPSP0C0P6 89 aa11.54□□□□□ -0.56
TNFSF13-204ENST00000396542 G0S2P27469 103 aa11.54□□□□□ -0.56
TNFSF13-204ENST00000396542 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
TNFSF13-204ENST00000396542 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 IGIPA6NJ69 53 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 XGP55808 180 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 LINC01620Q4KN68 170 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 Q6ZSA8 131 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 TOMM6Q96B49 74 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
TNFSF13-204ENST00000396542 SLPIP03973 132 aa11.52□□□□□ -0.57
TNFSF13-204ENST00000396542 C9orf163Q8N9P6 203 aa11.52□□□□□ -0.57
TNFSF13-204ENST00000396542 C18orf32Q8TCD1 76 aa11.52□□□□□ -0.57
TNFSF13-204ENST00000396542 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
TNFSF13-204ENST00000396542 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
TNFSF13-204ENST00000396542 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
TNFSF13-204ENST00000396542 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 AMELXQ99217 191 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 KRTAP17-1Q9BYP8 105 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 TMA7Q9Y2S6 64 aaKnown RBP11.5□□□□□ -0.57
TNFSF13-204ENST00000396542 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
TNFSF13-204ENST00000396542 COX7A2LO14548 114 aa11.49□□□□□ -0.57
TNFSF13-204ENST00000396542 HIGD2BQ4VC39 106 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms