RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
HERC4-203ENST00000395185 AMTP48728 403 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 PMCHL1Q16048 86 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 TTC32Q5I0X7 151 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 LELP1Q5T871 98 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 C2orf66Q6UXQ4 117 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 SPATA12Q7Z6I5 190 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
HERC4-203ENST00000395185 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
HERC4-203ENST00000395185 LYSTQ99698 3801 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 NBDYA0A0U1RRE5 68 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 A0A1B0GUV1 79 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 RPL39P62891 51 aaKnown RBP5.78□□□□□ -1.48
HERC4-203ENST00000395185 MRPS36P82909 103 aaKnown RBP5.78□□□□□ -1.48
HERC4-203ENST00000395185 LINC00173Q6ZV60 143 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 ERASQ7Z444 233 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 DEFB104AQ8WTQ1 72 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 TIMM17AQ99595 171 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 UPK3BQ9BT76 320 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 CYSLTR1Q9Y271 337 aa5.78□□□□□ -1.48
HERC4-203ENST00000395185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
HERC4-203ENST00000395185 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 ATP5LO75964 103 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 LEPROTL1O95214 131 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 BTF3P20290 206 aaKnown RBP5.77□□□□□ -1.49
HERC4-203ENST00000395185 Q6ZR54 194 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 Q8N976 141 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 SPANXA1Q9NS26 97 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 UBE2D4Q9Y2X8 147 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 HYDINQ4G0P3 5121 aa5.77□□□□□ -1.49
HERC4-203ENST00000395185 TRBV25-1A0A075B6N4 114 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 PRSS29PA6NIE9 313 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 SIVA1O15304 175 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 FABP4P15090 132 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 S100A2P29034 98 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 C6orf223Q8N319 242 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 IFI27L1Q96BM0 104 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 AMELXQ99217 191 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 HSPB8Q9UJY1 196 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 VPS13DQ5THJ4 4388 aa5.76□□□□□ -1.49
HERC4-203ENST00000395185 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 IGLV4-3A0A075B6K6 122 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
HERC4-203ENST00000395185 TRAV12-1A0A0B4J245 112 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 TRAV8-6A0A0B4J262 113 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
HERC4-203ENST00000395185 SYS1-DBNDD2H3BUS1 97 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 K7EP13 123 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 C3orf79P0CE67 100 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 FGF6P10767 208 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 ZNF25P17030 456 aaPredicted RBP5.75□□□□□ -1.49
HERC4-203ENST00000395185 OR10D4PQ8NGN7 298 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 SCGB3A1Q96QR1 104 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 CDC42SE2Q9NRR3 84 aa5.75□□□□□ -1.49
HERC4-203ENST00000395185 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.74□□□□□ -1.49
HERC4-203ENST00000395185 LINC01545Q5VT33 79 aa5.74□□□□□ -1.49
HERC4-203ENST00000395185 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
HERC4-203ENST00000395185 BAALCQ8WXS3 180 aa5.74□□□□□ -1.49
HERC4-203ENST00000395185 OPRPNQ99935 248 aaPredicted RBP5.74□□□□□ -1.49
HERC4-203ENST00000395185 CST9LQ9H4G1 147 aa5.74□□□□□ -1.49
HERC4-203ENST00000395185 IGLV4-60A0A075B6I1 120 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 RTL8CO15255 209 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 PKIAP61925 76 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 RBX1P62877 108 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 SMAGPQ0VAQ4 97 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 GAGE6Q13070 117 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 JOSD1Q15040 202 aaPredicted RBP5.73□□□□□ -1.49
HERC4-203ENST00000395185 FAM19A3Q7Z5A8 133 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 NFE4Q86UQ8 179 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 CHCHD5Q9BSY4 110 aa5.73□□□□□ -1.49
HERC4-203ENST00000395185 A0A087WX48 190 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 DNAH10OSP0CZ25 163 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 ODF1Q14990 250 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 PMVKQ15126 192 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 PAPPA-AS1Q5QFB9 102 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 C10orf126Q8N4M7 172 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 MAP1LC3CQ9BXW4 147 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 PRR34Q9NV39 138 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 RYR1P21817 5038 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 KMT2AQ03164 3969 aa5.72□□□□□ -1.49
HERC4-203ENST00000395185 ANKRD39Q53RE8 183 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 MPV17L2Q567V2 206 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 Q6ZUT4 128 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 WFDC10BQ8IUB3 73 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 OR5A1Q8NGJ0 315 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 VCX2Q9H322 139 aa5.71□□□□□ -1.5
HERC4-203ENST00000395185 IGLV4-69A0A075B6H9 119 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 UBE2L6O14933 153 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 PRSS1P07477 247 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 KRTDAPP60985 99 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 DGAT2L7PQ6IED9 249 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 Q6ZN92 141 aa5.7□□□□□ -1.5
HERC4-203ENST00000395185 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms