RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
RTN1-203ENST00000395090 A0A1B0GV90 55 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 GAGE10A6NGK3 116 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 LINC01549A6NIU2 74 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 H3BNG1 76 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 Q6ZTC4 211 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 GTSF1LQ9H1H1 148 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 TRAV26-1A0A087WT03 109 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 C3orf79P0CE67 100 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 NANOS2P60321 138 aaKnown RBP7.92□□□□□ -1.14
RTN1-203ENST00000395090 KRTDAPP60985 99 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 COTL1Q14019 142 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 C2orf66Q6UXQ4 117 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 LINC00173Q6ZV60 143 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 C20orf203Q8NBC4 194 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
RTN1-203ENST00000395090 SNHG12Q9BXW3 62 aa7.92□□□□□ -1.14
RTN1-203ENST00000395090 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
RTN1-203ENST00000395090 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
RTN1-203ENST00000395090 M0R143 59 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 HTN3P15516 51 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 SPATA12Q7Z6I5 190 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 ATP6V0E2Q8NHE4 81 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
RTN1-203ENST00000395090 STAB2Q8WWQ8 2551 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 A0A0J9YY99 117 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 ATP5LO75964 103 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 MRPL23Q16540 153 aaKnown RBP7.89□□□□□ -1.15
RTN1-203ENST00000395090 TMEM97Q5BJF2 176 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 ERASQ7Z444 233 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 SH2D6Q7Z4S9 175 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 IFI27L1Q96BM0 104 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 DEFB131BA0A096LNP1 70 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
RTN1-203ENST00000395090 SCGB3A1Q96QR1 104 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 MAP1LC3CQ9BXW4 147 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
RTN1-203ENST00000395090 A0A096LPF7 62 aa7.88□□□□□ -1.15
RTN1-203ENST00000395090 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
RTN1-203ENST00000395090 HUWE1Q7Z6Z7 4374 aaKnown RBP7.88□□□□□ -1.15
RTN1-203ENST00000395090 A0A0A0MQY5 61 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.87□□□□□ -1.15
RTN1-203ENST00000395090 SPATA45Q537H7 98 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 PET117Q6UWS5 81 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 TMEM141Q96I45 108 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 ICOSQ9Y6W8 199 aa7.87□□□□□ -1.15
RTN1-203ENST00000395090 H7C423 109 aa7.86□□□□□ -1.15
RTN1-203ENST00000395090 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
RTN1-203ENST00000395090 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
RTN1-203ENST00000395090 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
RTN1-203ENST00000395090 DNAH9Q9NYC9 4486 aa7.86□□□□□ -1.15
RTN1-203ENST00000395090 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 C20orf202A1L168 122 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 NTN5Q8WTR8 489 aaPredicted RBP7.85□□□□□ -1.15
RTN1-203ENST00000395090 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 UQCR10Q9UDW1 63 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
RTN1-203ENST00000395090 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.85□□□□□ -1.15
RTN1-203ENST00000395090 IGKV2-29A2NJV5 120 aaPredicted RBP7.85□□□□□ -1.15
RTN1-203ENST00000395090 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
RTN1-203ENST00000395090 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.15
RTN1-203ENST00000395090 PRSS1P07477 247 aa7.84□□□□□ -1.15
RTN1-203ENST00000395090 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.15
RTN1-203ENST00000395090 BAALCQ8WXS3 180 aa7.84□□□□□ -1.15
RTN1-203ENST00000395090 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 TRAV9-2A0A087WT02 112 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 MRPS36P82909 103 aaKnown RBP7.83□□□□□ -1.16
RTN1-203ENST00000395090 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 Q6ZN92 141 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 OPRPNQ99935 248 aaPredicted RBP7.83□□□□□ -1.16
RTN1-203ENST00000395090 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
RTN1-203ENST00000395090 FGF6P10767 208 aa7.82□□□□□ -1.16
RTN1-203ENST00000395090 SMAGPQ0VAQ4 97 aa7.82□□□□□ -1.16
RTN1-203ENST00000395090 PMVKQ15126 192 aa7.82□□□□□ -1.16
RTN1-203ENST00000395090 PAPPA-AS1Q5QFB9 102 aa7.82□□□□□ -1.16
RTN1-203ENST00000395090 CEMP1Q6PRD7 247 aaPredicted RBP7.82□□□□□ -1.16
RTN1-203ENST00000395090 AMELXQ99217 191 aa7.82□□□□□ -1.16
RTN1-203ENST00000395090 A0A087WX48 190 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 ZNF25P17030 456 aaPredicted RBP7.81□□□□□ -1.16
RTN1-203ENST00000395090 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 LELP1Q5T871 98 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 C15orf53Q8NAA6 179 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 CST9LQ9H4G1 147 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
RTN1-203ENST00000395090 A0A1B0GUV1 79 aa7.81□□□□□ -1.16
RTN1-203ENST00000395090 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
RTN1-203ENST00000395090 ATOH7Q8N100 152 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms