RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
CLIP2-203ENST00000395060 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
CLIP2-203ENST00000395060 COX6A2Q02221 97 aa10.43□□□□□ -0.74
CLIP2-203ENST00000395060 KHDC1LQ5JSQ8 128 aa10.43□□□□□ -0.74
CLIP2-203ENST00000395060 Q9H8V8 135 aa10.43□□□□□ -0.74
CLIP2-203ENST00000395060 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
CLIP2-203ENST00000395060 C18orf65Q6ZTR6 163 aa10.43□□□□□ -0.74
CLIP2-203ENST00000395060 IGKV3OR2-268A0A0C4DH90 116 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 IGLV1-40P01703 118 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 Q8N2B8 174 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 NF1P21359 2839 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 K7EQG2 157 aa10.42□□□□□ -0.74
CLIP2-203ENST00000395060 C10orf105Q8TEF2 133 aa10.41□□□□□ -0.74
CLIP2-203ENST00000395060 LST1O00453 97 aa10.41□□□□□ -0.74
CLIP2-203ENST00000395060 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
CLIP2-203ENST00000395060 TEX15Q9BXT5 2789 aa10.4□□□□□ -0.74
CLIP2-203ENST00000395060 LINC01587Q99440 93 aa10.4□□□□□ -0.74
CLIP2-203ENST00000395060 CITED2Q99967 270 aaPredicted RBP10.4□□□□□ -0.74
CLIP2-203ENST00000395060 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.74
CLIP2-203ENST00000395060 SLURP1P55000 103 aa10.4□□□□□ -0.75
CLIP2-203ENST00000395060 TMEM101Q96IK0 257 aa10.4□□□□□ -0.75
CLIP2-203ENST00000395060 Q9HAA7 133 aa10.4□□□□□ -0.75
CLIP2-203ENST00000395060 FN1P02751 2386 aaKnown RBP10.4□□□□□ -0.75
CLIP2-203ENST00000395060 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
CLIP2-203ENST00000395060 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
CLIP2-203ENST00000395060 AKAP9Q99996 3911 aa10.39□□□□□ -0.75
CLIP2-203ENST00000395060 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
CLIP2-203ENST00000395060 PSMB8P28062 276 aa10.38□□□□□ -0.75
CLIP2-203ENST00000395060 H3BT86 120 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 K7EMT4 169 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 MSMBP08118 114 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 SPANXDQ9BXN6 97 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 SPANXCQ9NY87 97 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
CLIP2-203ENST00000395060 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
CLIP2-203ENST00000395060 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
CLIP2-203ENST00000395060 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
CLIP2-203ENST00000395060 TINCRA0A1B0GVN0 87 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 H3BUA1 57 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
CLIP2-203ENST00000395060 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
CLIP2-203ENST00000395060 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
CLIP2-203ENST00000395060 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
CLIP2-203ENST00000395060 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
CLIP2-203ENST00000395060 KLK5Q9Y337 293 aaPredicted RBP10.35□□□□□ -0.75
CLIP2-203ENST00000395060 PYGO1Q9Y3Y4 419 aa10.35□□□□□ -0.75
CLIP2-203ENST00000395060 M0QXV9 152 aa10.35□□□□□ -0.75
CLIP2-203ENST00000395060 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CLIP2-203ENST00000395060 YAE1D1Q9NRH1 226 aa10.34□□□□□ -0.75
CLIP2-203ENST00000395060 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
CLIP2-203ENST00000395060 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
CLIP2-203ENST00000395060 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
CLIP2-203ENST00000395060 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
CLIP2-203ENST00000395060 Q6Q795 121 aa10.32□□□□□ -0.76
CLIP2-203ENST00000395060 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
CLIP2-203ENST00000395060 BBC3Q96PG8 261 aaPredicted RBP10.31□□□□□ -0.76
CLIP2-203ENST00000395060 LINC00242Q5T6M2 205 aa10.31□□□□□ -0.76
CLIP2-203ENST00000395060 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
CLIP2-203ENST00000395060 B4DSR2 109 aa10.31□□□□□ -0.76
CLIP2-203ENST00000395060 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CLIP2-203ENST00000395060 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
CLIP2-203ENST00000395060 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
CLIP2-203ENST00000395060 ACANP16112 2415 aa10.3□□□□□ -0.76
CLIP2-203ENST00000395060 BRI3O95415 125 aa10.3□□□□□ -0.76
CLIP2-203ENST00000395060 PPDPFQ9H3Y8 114 aa10.3□□□□□ -0.76
CLIP2-203ENST00000395060 NDUFA1O15239 70 aa10.29□□□□□ -0.76
CLIP2-203ENST00000395060 ZNF469Q96JG9 3925 aaPredicted RBP10.29□□□□□ -0.76
CLIP2-203ENST00000395060 NBPF19A0A087WUL8 3843 aa10.29□□□□□ -0.76
CLIP2-203ENST00000395060 COX7A2LO14548 114 aa10.29□□□□□ -0.76
CLIP2-203ENST00000395060 ATP5G1P05496 136 aa10.29□□□□□ -0.76
CLIP2-203ENST00000395060 LOC107984640A0A0U1RRK4 108 aa10.28□□□□□ -0.76
CLIP2-203ENST00000395060 KRTAP10-9P60411 292 aa10.28□□□□□ -0.76
CLIP2-203ENST00000395060 MTORP42345 2549 aa10.28□□□□□ -0.76
CLIP2-203ENST00000395060 TIRAPP58753 221 aa10.28□□□□□ -0.76
CLIP2-203ENST00000395060 A0A1W2PRX2 142 aa10.27□□□□□ -0.76
CLIP2-203ENST00000395060 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.76
CLIP2-203ENST00000395060 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
CLIP2-203ENST00000395060 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.77
CLIP2-203ENST00000395060 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
CLIP2-203ENST00000395060 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.77
CLIP2-203ENST00000395060 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
CLIP2-203ENST00000395060 SLPIP03973 132 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 PFN2P35080 140 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 Q6ZTI0 123 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 C14orf132Q9NPU4 83 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 PLA2G2AP14555 144 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 SETXQ7Z333 2677 aaKnown RBP10.25□□□□□ -0.77
CLIP2-203ENST00000395060 APCP25054 2843 aa10.25□□□□□ -0.77
CLIP2-203ENST00000395060 LOC100131303A0A0U1RQF7 123 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 Q96MF0 132 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 HERVK_113P63121 156 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms