RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 MIEN1Q9BRT3 115 aa17.11■□□□□ 0.33
CTF1-202ENST00000395019 TRAV26-1A0A087WT03 109 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 TRBV6-8A0A0A6YYG3 113 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 A0A0J9YY99 117 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 HTN3P15516 51 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 MRPL52Q86TS9 123 aaKnown RBP17.1■□□□□ 0.33
CTF1-202ENST00000395019 H7C423 109 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 MRPS36P82909 103 aaKnown RBP17.1■□□□□ 0.33
CTF1-202ENST00000395019 SMAGPQ0VAQ4 97 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 ANKRD39Q53RE8 183 aa17.1■□□□□ 0.33
CTF1-202ENST00000395019 IGLV4-69A0A075B6H9 119 aa17.09■□□□□ 0.33
CTF1-202ENST00000395019 UQCR10Q9UDW1 63 aa17.09■□□□□ 0.33
CTF1-202ENST00000395019 CSDC2Q9Y534 153 aaKnown RBP17.09■□□□□ 0.33
CTF1-202ENST00000395019 FGF6P10767 208 aa17.08■□□□□ 0.32
CTF1-202ENST00000395019 C14orf144Q96I85 54 aa17.08■□□□□ 0.32
CTF1-202ENST00000395019 LINC00587B1AMM8 73 aa17.07■□□□□ 0.32
CTF1-202ENST00000395019 DGAT2L7PQ6IED9 249 aa17.07■□□□□ 0.32
CTF1-202ENST00000395019 UBE2L6O14933 153 aa17.07■□□□□ 0.32
CTF1-202ENST00000395019 Q6ZUT4 128 aa17.07■□□□□ 0.32
CTF1-202ENST00000395019 DNAH7Q8WXX0 4024 aa17.06■□□□□ 0.32
CTF1-202ENST00000395019 C11orf86A6NJI1 115 aa17.05■□□□□ 0.32
CTF1-202ENST00000395019 Q6ZTC4 211 aa17.05■□□□□ 0.32
CTF1-202ENST00000395019 MRPL23Q16540 153 aaKnown RBP17.04■□□□□ 0.32
CTF1-202ENST00000395019 NFE4Q86UQ8 179 aa17.04■□□□□ 0.32
CTF1-202ENST00000395019 C11orf45Q8TAV5 145 aa17.04■□□□□ 0.32
CTF1-202ENST00000395019 COX8AP10176 69 aa17.03■□□□□ 0.32
CTF1-202ENST00000395019 RNASE13Q5GAN3 156 aaKnown RBP17.03■□□□□ 0.32
CTF1-202ENST00000395019 SH2D6Q7Z4S9 175 aa17.03■□□□□ 0.32
CTF1-202ENST00000395019 ICOSQ9Y6W8 199 aa17.03■□□□□ 0.32
CTF1-202ENST00000395019 A0A096LPF7 62 aa17.02■□□□□ 0.31
CTF1-202ENST00000395019 AMMECR1LQ6DCA0 310 aa17.02■□□□□ 0.31
CTF1-202ENST00000395019 OR5A1Q8NGJ0 315 aa17.02■□□□□ 0.31
CTF1-202ENST00000395019 C2orf88Q9BSF0 95 aa17.02■□□□□ 0.31
CTF1-202ENST00000395019 H3BNG1 76 aa17.01■□□□□ 0.31
CTF1-202ENST00000395019 ZNF25P17030 456 aaPredicted RBP17.01■□□□□ 0.31
CTF1-202ENST00000395019 CHCHD5Q9BSY4 110 aa17.01■□□□□ 0.31
CTF1-202ENST00000395019 NANOS2P60321 138 aaKnown RBP17■□□□□ 0.31
CTF1-202ENST00000395019 GAGE6Q13070 117 aa17■□□□□ 0.31
CTF1-202ENST00000395019 SLC25A34Q6PIV7 304 aa17■□□□□ 0.31
CTF1-202ENST00000395019 TMEM101Q96IK0 257 aa17■□□□□ 0.31
CTF1-202ENST00000395019 CDC42SE2Q9NRR3 84 aa17■□□□□ 0.31
CTF1-202ENST00000395019 TCTAP57738 103 aa16.99■□□□□ 0.31
CTF1-202ENST00000395019 CHAC1Q9BUX1 264 aa16.99■□□□□ 0.31
CTF1-202ENST00000395019 A0A0J9YXV3 536 aa16.99■□□□□ 0.31
CTF1-202ENST00000395019 IGKV2D-26A0A0A0MRZ7 120 aa16.98■□□□□ 0.31
CTF1-202ENST00000395019 NMUP48645 174 aa16.98■□□□□ 0.31
CTF1-202ENST00000395019 CSMD3Q7Z407 3707 aa16.97■□□□□ 0.31
CTF1-202ENST00000395019 UBE2D1P51668 147 aa16.96■□□□□ 0.31
CTF1-202ENST00000395019 HNRNPA3P51991 378 aaKnown RBP16.96■□□□□ 0.3
CTF1-202ENST00000395019 BOD1L2Q8IYS8 172 aa16.96■□□□□ 0.3
CTF1-202ENST00000395019 TINCRA0A1B0GVN0 87 aa16.95■□□□□ 0.3
CTF1-202ENST00000395019 E9PLD3 99 aa16.95■□□□□ 0.3
CTF1-202ENST00000395019 DLEU1O43261 78 aa16.95■□□□□ 0.3
CTF1-202ENST00000395019 TMEM170BQ5T4T1 132 aa16.95■□□□□ 0.3
CTF1-202ENST00000395019 DEFB131BA0A096LNP1 70 aa16.94■□□□□ 0.3
CTF1-202ENST00000395019 ZNF22P17026 224 aaPredicted RBP16.94■□□□□ 0.3
CTF1-202ENST00000395019 HERVK_113P61574 105 aa16.94■□□□□ 0.3
CTF1-202ENST00000395019 TP73-AS1Q9UF72 201 aa16.94■□□□□ 0.3
CTF1-202ENST00000395019 PCP2Q8IVA1 136 aa16.93■□□□□ 0.3
CTF1-202ENST00000395019 FAM19A3Q7Z5A8 133 aa16.92■□□□□ 0.3
CTF1-202ENST00000395019 IGLV4-60A0A075B6I1 120 aa16.92■□□□□ 0.3
CTF1-202ENST00000395019 A0A1B0GUV1 79 aa16.92■□□□□ 0.3
CTF1-202ENST00000395019 TIRAPP58753 221 aa16.92■□□□□ 0.3
CTF1-202ENST00000395019 LELP1Q5T871 98 aa16.92■□□□□ 0.3
CTF1-202ENST00000395019 MRPS16Q9Y3D3 137 aaKnown RBP16.92■□□□□ 0.3
CTF1-202ENST00000395019 TMEM223A0PJW6 202 aa16.9■□□□□ 0.3
CTF1-202ENST00000395019 TMEM262E9PQX1 116 aa16.9■□□□□ 0.3
CTF1-202ENST00000395019 SEC11AP67812 179 aa16.89■□□□□ 0.29
CTF1-202ENST00000395019 CTAG1AP78358 180 aa16.89■□□□□ 0.29
CTF1-202ENST00000395019 TRAV10A0A0B4J240 114 aa16.88■□□□□ 0.29
CTF1-202ENST00000395019 RBX1P62877 108 aa16.88■□□□□ 0.29
CTF1-202ENST00000395019 GEMIN7Q9H840 131 aaKnown RBP16.88■□□□□ 0.29
CTF1-202ENST00000395019 DYNC2H1Q8NCM8 4307 aaKnown RBP16.88■□□□□ 0.29
CTF1-202ENST00000395019 STARD9Q9P2P6 4700 aa16.88■□□□□ 0.29
CTF1-202ENST00000395019 LINC00242Q5T6M2 205 aa16.88■□□□□ 0.29
CTF1-202ENST00000395019 LYPD5Q6UWN5 251 aa16.88■□□□□ 0.29
CTF1-202ENST00000395019 IGLV5-45A0A087WSX0 123 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 TRAV13-1A0A0B4J241 112 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 TRAV8-6A0A0B4J262 113 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 MPV17L2Q567V2 206 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 C2orf91Q6ZV80 131 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 TTTY13Q9BZ97 58 aa16.87■□□□□ 0.29
CTF1-202ENST00000395019 SIVA1O15304 175 aa16.86■□□□□ 0.29
CTF1-202ENST00000395019 HERVK_113P63121 156 aa16.85■□□□□ 0.29
CTF1-202ENST00000395019 MAPKAPK5-AS1Q8N8E1 139 aa16.85■□□□□ 0.29
CTF1-202ENST00000395019 LINC00469Q8N7U9 141 aa16.85■□□□□ 0.29
CTF1-202ENST00000395019 COX6A2Q02221 97 aa16.84■□□□□ 0.29
CTF1-202ENST00000395019 LEPROTO15243 131 aa16.82■□□□□ 0.28
CTF1-202ENST00000395019 CDKN2A-AS1Q9UH64 79 aa16.81■□□□□ 0.28
CTF1-202ENST00000395019 MYMXA0A1B0GTQ4 84 aa16.81■□□□□ 0.28
CTF1-202ENST00000395019 H3BRM9 83 aa16.81■□□□□ 0.28
CTF1-202ENST00000395019 M0R143 59 aa16.81■□□□□ 0.28
CTF1-202ENST00000395019 WWC2-AS2Q96NR7 200 aa16.8■□□□□ 0.28
CTF1-202ENST00000395019 IGHV1-58A0A0C4DH39 117 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 J3QQQ9 107 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 TSPEAR-AS2P59090 65 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 PLEKHB2Q96CS7 222 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 SNHG12Q9BXW3 62 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 HIGD1BQ9P298 99 aa16.79■□□□□ 0.28
CTF1-202ENST00000395019 C15orf53Q8NAA6 179 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms