RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 HBBP68871 147 aa12.48□□□□□ -0.41
UPK3B-203ENST00000394849 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
UPK3B-203ENST00000394849 PLAC8Q9NZF1 115 aa12.48□□□□□ -0.41
UPK3B-203ENST00000394849 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
UPK3B-203ENST00000394849 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
UPK3B-203ENST00000394849 NCR2O95944 276 aa12.47□□□□□ -0.41
UPK3B-203ENST00000394849 FAM104BQ5XKR9 115 aa12.47□□□□□ -0.41
UPK3B-203ENST00000394849 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 I3L3M4 83 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 PHOX2AO14813 284 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 PPP1R17O96001 155 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 APCSP02743 223 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 CLPSL2Q6UWE3 100 aa12.46□□□□□ -0.41
UPK3B-203ENST00000394849 RPS10P46783 165 aaKnown RBP12.45□□□□□ -0.42
UPK3B-203ENST00000394849 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
UPK3B-203ENST00000394849 ATP5L2Q7Z4Y8 100 aa12.45□□□□□ -0.42
UPK3B-203ENST00000394849 A0A1B0GXF2 115 aa12.44□□□□□ -0.42
UPK3B-203ENST00000394849 REG3AQ06141 175 aa12.44□□□□□ -0.42
UPK3B-203ENST00000394849 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
UPK3B-203ENST00000394849 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
UPK3B-203ENST00000394849 LINC00862A6NCI5 91 aa12.43□□□□□ -0.42
UPK3B-203ENST00000394849 CHTF8P0CG12 524 aa12.43□□□□□ -0.42
UPK3B-203ENST00000394849 CKS2P33552 79 aa12.43□□□□□ -0.42
UPK3B-203ENST00000394849 A0A1B0GUV1 79 aa12.42□□□□□ -0.42
UPK3B-203ENST00000394849 AMMECR1LQ6DCA0 310 aa12.42□□□□□ -0.42
UPK3B-203ENST00000394849 TMEM242Q9NWH2 141 aa12.42□□□□□ -0.42
UPK3B-203ENST00000394849 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
UPK3B-203ENST00000394849 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
UPK3B-203ENST00000394849 SUMO2P61956 95 aaKnown RBP12.41□□□□□ -0.42
UPK3B-203ENST00000394849 REG3GQ6UW15 175 aa12.41□□□□□ -0.42
UPK3B-203ENST00000394849 NRACQ8N912 160 aa12.41□□□□□ -0.42
UPK3B-203ENST00000394849 IGLV4-60A0A075B6I1 120 aa12.4□□□□□ -0.42
UPK3B-203ENST00000394849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.4□□□□□ -0.42
UPK3B-203ENST00000394849 IGKV2-29A2NJV5 120 aaPredicted RBP12.4□□□□□ -0.42
UPK3B-203ENST00000394849 VCYO14598 125 aa12.4□□□□□ -0.42
UPK3B-203ENST00000394849 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
UPK3B-203ENST00000394849 RNASEKQ6P5S7 137 aaKnown RBP12.4□□□□□ -0.42
UPK3B-203ENST00000394849 C20orf203Q8NBC4 194 aa12.4□□□□□ -0.42
UPK3B-203ENST00000394849 BTF3L4Q96K17 158 aa12.4□□□□□ -0.42
UPK3B-203ENST00000394849 TRBV27A0A0K0K1C4 114 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 H7C423 109 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 TSHBP01222 138 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 SLPIP03973 132 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 FCER1GP30273 86 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 KRTAP10-8P60410 259 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
UPK3B-203ENST00000394849 D6R8Y8 96 aa12.38□□□□□ -0.43
UPK3B-203ENST00000394849 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
UPK3B-203ENST00000394849 SPINK6Q6UWN8 80 aa12.38□□□□□ -0.43
UPK3B-203ENST00000394849 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
UPK3B-203ENST00000394849 PPBPP02775 128 aa12.37□□□□□ -0.43
UPK3B-203ENST00000394849 FGF6P10767 208 aa12.37□□□□□ -0.43
UPK3B-203ENST00000394849 IMMP2LQ96T52 175 aa12.37□□□□□ -0.43
UPK3B-203ENST00000394849 C20orf78Q9BR46 151 aa12.37□□□□□ -0.43
UPK3B-203ENST00000394849 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
UPK3B-203ENST00000394849 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
UPK3B-203ENST00000394849 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
UPK3B-203ENST00000394849 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
UPK3B-203ENST00000394849 ESDP10768 282 aa12.35□□□□□ -0.43
UPK3B-203ENST00000394849 COX6A2Q02221 97 aa12.35□□□□□ -0.43
UPK3B-203ENST00000394849 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
UPK3B-203ENST00000394849 IGKV3OR2-268A0A0C4DH90 116 aa12.34□□□□□ -0.43
UPK3B-203ENST00000394849 NPYP01303 97 aa12.34□□□□□ -0.43
UPK3B-203ENST00000394849 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
UPK3B-203ENST00000394849 S100PP25815 95 aa12.34□□□□□ -0.43
UPK3B-203ENST00000394849 MAJINQ3KP22 176 aa12.34□□□□□ -0.43
UPK3B-203ENST00000394849 TMEM136Q6ZRR5 245 aa12.34□□□□□ -0.43
UPK3B-203ENST00000394849 CARHSP1Q9Y2V2 147 aaKnown RBP12.34□□□□□ -0.43
UPK3B-203ENST00000394849 C10orf91Q5T1B1 145 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 PRELID3AQ96N28 172 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 SMIM2Q9BVW6 85 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 LINC00474Q9P2X8 69 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 PKIGQ9Y2B9 76 aa12.33□□□□□ -0.44
UPK3B-203ENST00000394849 TCAPO15273 167 aa12.32□□□□□ -0.44
UPK3B-203ENST00000394849 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
UPK3B-203ENST00000394849 ODF1Q14990 250 aa12.32□□□□□ -0.44
UPK3B-203ENST00000394849 STPG4Q8N801 248 aa12.32□□□□□ -0.44
UPK3B-203ENST00000394849 TRAV9-1A0A075B6T8 112 aa12.31□□□□□ -0.44
UPK3B-203ENST00000394849 SMAGPQ0VAQ4 97 aa12.31□□□□□ -0.44
UPK3B-203ENST00000394849 RHEBQ15382 184 aa12.31□□□□□ -0.44
UPK3B-203ENST00000394849 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
UPK3B-203ENST00000394849 RPS10P5Q9NQ39 176 aa12.31□□□□□ -0.44
UPK3B-203ENST00000394849 IGKV2-24A0A0C4DH68 120 aa12.3□□□□□ -0.44
UPK3B-203ENST00000394849 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
UPK3B-203ENST00000394849 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
UPK3B-203ENST00000394849 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
UPK3B-203ENST00000394849 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
UPK3B-203ENST00000394849 LAMTOR2Q9Y2Q5 125 aa12.29□□□□□ -0.44
UPK3B-203ENST00000394849 APOC3P02656 99 aa12.28□□□□□ -0.44
UPK3B-203ENST00000394849 MAP1LC3AQ9H492 121 aa12.28□□□□□ -0.44
UPK3B-203ENST00000394849 RAB5AP20339 215 aa12.27□□□□□ -0.45
UPK3B-203ENST00000394849 SRSF9Q13242 221 aaKnown RBP eCLIP12.27□□□□□ -0.45
UPK3B-203ENST00000394849 Q6ZRP5 223 aa12.27□□□□□ -0.45
UPK3B-203ENST00000394849 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
UPK3B-203ENST00000394849 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
UPK3B-203ENST00000394849 ZNF664Q8N3J9 261 aa12.25□□□□□ -0.45
UPK3B-203ENST00000394849 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
UPK3B-203ENST00000394849 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms