RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 C18orf65Q6ZTR6 163 aa9.78□□□□□ -0.84
NFKB1-202ENST00000394820 KRTAP10-9P60411 292 aa9.77□□□□□ -0.84
NFKB1-202ENST00000394820 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.84
NFKB1-202ENST00000394820 C5orf38Q86SI9 138 aa9.77□□□□□ -0.84
NFKB1-202ENST00000394820 ZNF415Q09FC8 603 aa9.77□□□□□ -0.85
NFKB1-202ENST00000394820 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
NFKB1-202ENST00000394820 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
NFKB1-202ENST00000394820 ATP5G1P05496 136 aa9.77□□□□□ -0.85
NFKB1-202ENST00000394820 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.85
NFKB1-202ENST00000394820 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
NFKB1-202ENST00000394820 A0A0J9YX75 114 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 ESM1Q9NQ30 184 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 YAE1D1Q9NRH1 226 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 LGALS9O00182 355 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 POM121L12Q8N7R1 296 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 LINC01356Q8N9X3 169 aa9.76□□□□□ -0.85
NFKB1-202ENST00000394820 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
NFKB1-202ENST00000394820 RPL36AP83881 106 aaKnown RBP9.75□□□□□ -0.85
NFKB1-202ENST00000394820 TMEM61Q8N0U2 210 aa9.75□□□□□ -0.85
NFKB1-202ENST00000394820 RPL36ALQ969Q0 106 aaKnown RBP9.75□□□□□ -0.85
NFKB1-202ENST00000394820 CRPP02741 224 aa9.75□□□□□ -0.85
NFKB1-202ENST00000394820 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
NFKB1-202ENST00000394820 TRBV10-2A0A0K0K1G8 114 aa9.74□□□□□ -0.85
NFKB1-202ENST00000394820 PSMG3-AS1Q96PY0 264 aa9.74□□□□□ -0.85
NFKB1-202ENST00000394820 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
NFKB1-202ENST00000394820 BBC3Q96PG8 261 aaPredicted RBP9.74□□□□□ -0.85
NFKB1-202ENST00000394820 RHOHQ15669 191 aa9.73□□□□□ -0.85
NFKB1-202ENST00000394820 UBE2D3P61077 147 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 UBE2D2P62837 147 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 C6orf226Q5I0X4 101 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 HECTD1Q9ULT8 2610 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 FLNAP21333 2647 aaKnown RBP9.72□□□□□ -0.85
NFKB1-202ENST00000394820 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 NSUN5P1Q3KNT7 163 aa9.72□□□□□ -0.85
NFKB1-202ENST00000394820 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 Q96MF0 132 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 SLPIP03973 132 aa9.71□□□□□ -0.85
NFKB1-202ENST00000394820 TMEM263Q8WUH6 116 aaKnown RBP9.71□□□□□ -0.85
NFKB1-202ENST00000394820 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.86
NFKB1-202ENST00000394820 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
NFKB1-202ENST00000394820 INSP01308 110 aa9.7□□□□□ -0.86
NFKB1-202ENST00000394820 Q6ZSN1 163 aa9.7□□□□□ -0.86
NFKB1-202ENST00000394820 H7C423 109 aa9.69□□□□□ -0.86
NFKB1-202ENST00000394820 XCL1P47992 114 aa9.69□□□□□ -0.86
NFKB1-202ENST00000394820 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
NFKB1-202ENST00000394820 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
NFKB1-202ENST00000394820 KLLNB2CW77 178 aa9.68□□□□□ -0.86
NFKB1-202ENST00000394820 Q6ZTI0 123 aa9.68□□□□□ -0.86
NFKB1-202ENST00000394820 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
NFKB1-202ENST00000394820 PEMTQ9UBM1 199 aa9.68□□□□□ -0.86
NFKB1-202ENST00000394820 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
NFKB1-202ENST00000394820 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
NFKB1-202ENST00000394820 DAZ4Q86SG3 579 aaKnown RBP9.68□□□□□ -0.86
NFKB1-202ENST00000394820 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
NFKB1-202ENST00000394820 DAZ3Q9NR90 486 aaKnown RBP9.68□□□□□ -0.86
NFKB1-202ENST00000394820 ITPR3Q14573 2671 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 LINC00315P59091 139 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 MIAQ16674 131 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 WFDC11Q8NEX6 87 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 K7EQG2 157 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
NFKB1-202ENST00000394820 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 SOCS3O14543 225 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 DEFB4AO15263 64 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 PLA2G2AP14555 144 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 PSMB8P28062 276 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 KLK5Q9Y337 293 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-202ENST00000394820 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
NFKB1-202ENST00000394820 A0A0B4J2C4 111 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 DSCR9P59020 149 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 COX6A2Q02221 97 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 H3BUA1 57 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 LECT2O14960 151 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
NFKB1-202ENST00000394820 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 MED14OSP0DP75 135 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 CITED1Q99966 193 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 LINC01619G3V211 115 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 TMEM243Q9BU79 118 aa9.63□□□□□ -0.87
NFKB1-202ENST00000394820 HERVK_113P63121 156 aa9.62□□□□□ -0.87
NFKB1-202ENST00000394820 IGHV4-31P0DP07 118 aa9.62□□□□□ -0.87
NFKB1-202ENST00000394820 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
NFKB1-202ENST00000394820 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
NFKB1-202ENST00000394820 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
NFKB1-202ENST00000394820 MALP21145 153 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 COPS9Q8WXC6 57 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
NFKB1-202ENST00000394820 LAMTOR3Q9UHA4 124 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms